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View Structure Prediction Details

Protein: gi|28466881, gi|...
Organism: Arabidopsis thaliana
Length: 108 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|28466881, gi|....

Description E-value Query
Range
Subject
Range
gi|20197310, gi|... - gi|20197310|gb|AAC63620.2| putative small nuclear ribonucleoprotein D2 [Arabidopsis thaliana], gi|20...
122.0 [0..1] [108..1]

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Predicted Domain #1
Region A:
Residues: [1-108]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSKPMEEDTN GKTEEEEFNT GPLSVLMMSV KNNTQVLINC RNNRKLLGRV RAFDRHCNMV  60
   61 LENVREMWTE VPKTGKGKKK ALPVNRDRFI SKMFLRGDSV IIVLRNPK

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Detection Method: PSI-BLAST
Confidence: 23.0
Match: 1b34B
Description: D2 core SNRNP protein
Matching Structure (courtesy of the PDB):

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle