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View Structure Prediction Details

Protein: LEA2R_ARATH
Organism: Arabidopsis thaliana
Length: 166 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for LEA2R_ARATH.

Description E-value Query
Range
Subject
Range
gi|21555248 - gi|21555248|gb|AAM63814.1| putative desiccation related protein [Arabidopsis thaliana]
237.0 [0..1] [166..1]

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Predicted Domain #1
Region A:
Residues: [1-166]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MASADEKVVE EKASVISSLL DKAKGFFAEK LANIPTPEAT VDDVDFKGVT RDGVDYHAKV  60
   61 SVKNPYSQSI PICQISYILK SATRTIASGT IPDPGSLVGS GTTVLDVPVK VAYSIAVSLM 120
  121 KDMCTDWDID YQLDIGLTFD IPVVGDITIP VSTQGEIKLP SLRDFF

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 62.69897
Match: 1yycA
Description: Solution Structure of a putative late embryogenesis abundant (LEA) protein At2g46140.1
Matching Structure (courtesy of the PDB):

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle