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View Structure Prediction Details

Protein: CIPKB_ARATH
Organism: Arabidopsis thaliana
Length: 435 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for CIPKB_ARATH.

Description E-value Query
Range
Subject
Range
CIPKN_ARATH - CBL-interacting serine/threonine-protein kinase 23 OS=Arabidopsis thaliana GN=CIPK23 PE=1 SV=1
353.0 [0..18] [431..28]

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Predicted Domain #1
Region A:
Residues: [1-342]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MPEIEIAAGS GDNNDALFGK YELGKLLGCG AFAKVFHARD RRTGQSVAVK ILNKKKLLTN  60
   61 PALANNIKRE ISIMRRLSHP NIVKLHEVMA TKSKIFFAME FVKGGELFNK ISKHGRLSED 120
  121 LSRRYFQQLI SAVGYCHARG VYHRDLKPEN LLIDENGNLK VSDFGLSALT DQIRPDGLLH 180
  181 TLCGTPAYVA PEILSKKGYE GAKVDVWSCG IVLFVLVAGY LPFNDPNVMN MYKKIYKGEY 240
  241 RFPRWMSPDL KRFVSRLLDI NPETRITIDE ILKDPWFVRG GFKQIKFHDD EIEDQKVESS 300
  301 LEAVKSLNAF DLISYSSGLD LSGLFAGCSN SSGESERFLS EK

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 75.522879
Match: 1zmuA
Description: Catalytic and ubiqutin-associated domains of MARK2/PAR-1: Wild type
Matching Structure (courtesy of the PDB):

Predicted Domain #2
Region A:
Residues: [343-435]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 SPEMLAEEVE GFAREENLRM KKKKEEEYGF EMEGQNGKFG IGICISRLND LLVVVEARRR  60
   61 GGDGDCYKEM WNGKLRVQLI RVCDQTSSTN AAI

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 19.0
Match: 2ehbD
Description: No description for 2ehbD was found.

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle