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View Structure Prediction Details

Protein: gi|28973736, gi|...
Organism: Arabidopsis thaliana
Length: 318 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|28973736, gi|....

Description E-value Query
Range
Subject
Range
gi|41205692 - gi|41205692|gb|AAR99612.1| dTDP-glucose 4,6-dehydratase [Geobacillus stearothermophilus]
295.0 [0..5] [316..4]

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Predicted Domain #1
Region A:
Residues: [1-318]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAKETVCVTG ANGFIGSWII RTLIEKGYTK IHASIYPGSD PTHLLQLPGS DSKIKIFEAD  60
   61 LLDSDAISRA IDGCAGVFHV ASPCTLDPPV DPEKELVEPA VKGTINVLEA AKRFNVRRVV 120
  121 ITSSISALVP NPNWPEKVPV DESSWSDLDF CKSRQKWYPI SKTLAEKAAW EFSEKHGTNI 180
  181 VTIHPSTCLG PLLQPNLNAS CAVLLQLLQG STETQEHHWL GVVHVKDVAK GHVMLFETPD 240
  241 ASGRFLCTNG IYQFSEFAAL VSKLFPEFAV HKFDKETQPG LTSCNDAAKR LIELGLVFTA 300
  301 VEDAVKETVQ SLRDKGFL

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 53.69897
Match: 2c29D
Description: No description for 2c29D was found.

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle