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View Structure Prediction Details

Protein: SKI32_ARATH
Organism: Arabidopsis thaliana
Length: 328 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for SKI32_ARATH.

Description E-value Query
Range
Subject
Range
gi|222628891 - gi|222628891|gb|EEE61023.1| hypothetical protein OsJ_14851 [Oryza sativa Japonica Group]
gi|116309981 - gi|116309981|emb|CAH67009.1| OSIGBa0160I14.7 [Oryza sativa (indica cultivar-group)]
265.0 [0..2] [328..4]

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Predicted Domain #1
Region A:
Residues: [1-328]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MTSDALTIPS ELESALRLRT VQYFITKRPW LDLYGVHVRP VPPFGSTSRK PHFDPALIHR  60
   61 CLPDELLFEV FARMMPYDLG RASCVCRKWR YTVRNPMFWR NACLKAWQTA GVIENYKILQ 120
  121 SKYDGSWRKM WLLRSRVRTD GLYVSRNTYI RAGIAEWKIT NPVHIVCYYR YIRFYPSGRF 180
  181 LYKNSSQKLK DVAKYMNFKA SKSENLYKGT YTLSMSDDKI EAAVLYPGTR PTVLRIRLRL 240
  241 RGTAIGANNR MDLLSLVTSG VNDEEISSTE EDILGLVEGW EDDETHNPDI PAVSHKRGMT 300
  301 AFVFVPFEEV DESVLNLPPE KMDYYVTG

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 39.221849
Match: 2ovpB
Description: No description for 2ovpB was found.

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle