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View Structure Prediction Details

Protein: CM3_ARATH
Organism: Arabidopsis thaliana
Length: 316 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for CM3_ARATH.

Description E-value Query
Range
Subject
Range
gi|4512122 - gi|4512122|gb|AAD21624.1| chorismate mutase 3 [Arabidopsis thaliana]
554.0 [0..1] [316..1]

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Predicted Domain #1
Region A:
Residues: [1-316]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MEAKLLKPAF YNSPNLNLTN SSRLISRLSI WNDKSKVGLS SGSLFLRLSA ASPIRYSRGL  60
   61 LRVDESEYLK LESIRHSLIR QEDSIIFNLL ERAQYRYNAD TYDEDAFTME GFQGSLVEFM 120
  121 VRETEKLHAK VDRYKSPDEH PFFPQCLPEP ILPPIQYPQV LHRCAESINI NKKVWNMYFK 180
  181 HLLPRLVKPG DDGNCGSAAL CDTMCLQILS KRIHFGKFVA EAKFRENPAA YETAIKEQDR 240
  241 TQLMQLLTYE TVEEVVKKRV EIKARIFGQD ITINDPETEA DPSYKIQPSL VAKLYGERIM 300
  301 PLTKEVQIEY LLRRLD

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 103.0
Match: 2csmA
Description: Allosteric chorismate mutase
Matching Structure (courtesy of the PDB):

Predicted functions:

Term Confidence Notes
chorismate mutase activity 3.78733095924257 bayes_pls_golite062009
catalytic activity 1.09506175640279 bayes_pls_golite062009

YRC Informatics Platform - Version 3.0
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