| Protein: | SEBP3_ARATH |
| Organism: | Arabidopsis thaliana |
| Length: | 480 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for SEBP3_ARATH.
| Description | E-value | Query Range |
Subject Range |
|
|
743.0 | [0..8] | [480..138] |
|
Region A: Residues: [1-186] |
1 11 21 31 41 51
| | | | | |
1 MEAAMNNHDG DCCKSGPGYA TPLLAMSGPR EKLIYVAAIY TGTGQAKPDY LATVDVEPSS 60
61 STYSSVIHRL PMPYLEDELH HSGWNSCSSC YGDSSCERRY LILPSLLSGR IYVIDTKTNP 120
121 REPSLHKFVD PAEVLEKTGL AYPHQPHCLA SGDVLVSCLG DEDGNAEGSG FLLLDSEFNI 180
181 KGRWEK
|
| Detection Method: |  |
Shown below is our most confident prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [187-480] |
1 11 21 31 41 51
| | | | | |
1 DGNSPLYGYD FWYQPRHKTM ISTSWGAPAA FTKGFDLKDV SDGLYGKHLH VYSWPQGELK 60
61 QILDLGDTGL LPLEVRFLHE PDKATGFAGC ALSSTLVRFF KNDDETWSHE VAISVEPLKV 120
121 ENWILPEMPG LITDFLISLD DRFLYCSNWL HGDIRQYNIE DPKTPVLTGQ IHVGGLVQKG 180
181 SLVLALGEEG KAFQFDVPKI KGQRLRGGPQ MFQLSLDGKR LYVTNSLFSV WDRQFYPELV 240
241 EKGSHMLQID VDTDKGGLSI NPNFFVDFGT EPDGPSLAHE MRYPGGDCTS DIWV
|
| Detection Method: | |
| Confidence: | 26.045757 |
| Match: | 1l0qA |
| Description: | Surface layer protein |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| binding | 0.565955069185473 | bayes_pls_golite062009 |
| protein binding | 0.188092612225384 | bayes_pls_golite062009 |
