| Protein: | CCB1_ARATH |
| Organism: | Arabidopsis thaliana |
| Length: | 267 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for CCB1_ARATH.
| Description | E-value | Query Range |
Subject Range |
|
|
358.0 | [0..1] | [267..1] |
|
|
224.0 | [0..81] | [264..80] |
|
|
218.0 | [0..85] | [257..3] |
|
|
205.0 | [0..87] | [253..4] |
|
|
200.0 | [0..85] | [249..3] |
|
|
198.0 | [0..85] | [252..4] |
|
|
197.0 | [0..99] | [252..18] |
|
|
196.0 | [0..98] | [257..16] |
|
|
196.0 | [0..85] | [252..4] |
|
|
196.0 | [0..85] | [257..3] |
|
Region A: Residues: [1-79] |
1 11 21 31 41 51
| | | | | |
1 MATKLISPPL SCPWVTSREV IIKGLPRRRR EWMVTKRNRV SAVTAMIVEP LSVVSSSAIQ 60
61 IHQWWEQNPN SLLLMTEAT
|
| Detection Method: |  |
Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.
| MCM Score |
SCOP Match |
SCOP Description | ||
| View | Download | 0.850 | a.80.1 | DNA polymerase III clamp loader subunits, C-terminal domain |
| View | Download | 0.638 | a.28.3 | Retrovirus capsid protein C-terminal domain |
| View | Download | 0.638 | a.28.3 | Retrovirus capsid protein C-terminal domain |
| View | Download | 0.578 | d.242.1 | Description not found. |
| View | Download | 0.546 | a.64.1 | Saposin |
| View | Download | 0.546 | a.64.1 | Saposin |
| View | Download | 0.521 | d.47.1 | Ribosomal protein L11, N-terminal domain |
| View | Download | 0.448 | a.74.1 | Cyclin-like |
| View | Download | 0.403 | a.4.5 | "Winged helix" DNA-binding domain |
| View | Download | 0.386 | a.130.1 | Chorismate mutase II |
| View | Download | 0.322 | a.126.1 | Serum albumin-like |
| View | Download | 0.303 | a.4.1 | Homeodomain-like |
| View | Download | 0.299 | d.150.1 | 4'-phosphopantetheinyl transferase |
| View | Download | 0.282 | d.150.1 | 4'-phosphopantetheinyl transferase |
| View | Download | 0.272 | a.240.1 | Description not found. |
|
Region A: Residues: [80-267] |
1 11 21 31 41 51
| | | | | |
1 GGYSLASYYT SLGLFVISVP GLWSLIKRSV KSKIVRKTFV VNDVKKEPKQ VAGEILSFFT 60
61 RKNFNITDRG ETITFEGKMV PSRGQAALLT FCTCISLASV GLVLTITVPD FGNNWFFIIL 120
121 LSPLAGVYYW KKASRKEEIK VKMMVGSKGR LDEIVVQGDD VQVEEMRKEL QLNEKGMVYV 180
181 KGLFERSS
|
| Detection Method: | |
Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.
Found no structure predictions for this domain.
