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View Structure Prediction Details

Protein: PRP2_ARATH
Organism: Arabidopsis thaliana
Length: 321 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for PRP2_ARATH.

Description E-value Query
Range
Subject
Range
gi|7620011 - gi|7620011|gb|AAF64549.1|AF110986_1 proline-rich protein 2 [Arabidopsis thaliana]
166.0 [0..1] [321..1]

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Predicted Domain #1
Region A:
Residues: [1-212]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MRILPKSGGG ALCLLFVFAL CSVAHSLSCD VKVVGDVEVI GYSEISKIKI PNAFSGLRVT  60
   61 IECKAADSKG HFVTRGSGEV DETGKFHLNI PHDIVGDDGT LKEACYAHLQ SAFGNPCPAH 120
  121 DGLEASKIVF LSKSGQNHVL GLKKSLKFSP EVCISKFFWH MPKFPLPPPL NLPPLTFPKI 180
  181 KKPCPPIYKP PVVIPKKPCP PKIAHKPIYK PP

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 3.69897
Match: 1i3qA
Description: RBP1
Matching Structure (courtesy of the PDB):

Predicted Domain #2
Region A:
Residues: [213-321]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 VPIYKPPVPI YKPPVVIPKK PCPPKIHKPI YKPPVPIYKP PVVIPKKTFP PLHKPIYKHP  60
   61 VPIYKPIFKP PVVVIPKKPC PPLPKFPHFP PKYIPHPKFG KWPPFPSHP

[Run NCBI BLAST on this sequence.]

Detection Method: FFAS03
Confidence: 1.48
Match: 2j63A
Description: No description for 2j63A was found.

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle