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View Structure Prediction Details

Protein: SAU20_ARATH
Organism: Arabidopsis thaliana
Length: 91 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for SAU20_ARATH.

Description E-value Query
Range
Subject
Range
SAU22_ARATH - Auxin-responsive protein SAUR22 OS=Arabidopsis thaliana GN=SAUR22 PE=2 SV=1
147.0 [0..1] [90..1]
gi|7442216, gi|3... - pir||T07798 auxin-induced protein SAUR - radish (fragment), gi|3043536|dbj|BAA25434.1| SAUR [Raphan...
141.0 [0..1] [89..1]
gi|7488613, gi|2... - pir||T17020 auxin-induced protein - apple tree, gi|2924327|emb|CAB07785.1| hypothetical protein [Mal...
132.0 [0..2] [89..10]

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Predicted Domain #1
Region A:
Residues: [1-91]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAFVRSLLGA KKILSRSTTA ASAAPKGFLA VYVGESQKKR YLVPISYLNQ PSFQALLSKS  60
   61 EEEFGFDHPM GGLTIPCPED TFINVTSRFQ R

[Run NCBI BLAST on this sequence.]

Detection Method: Pfam
Confidence: 42.721246
Match: PF02519.5
Description: No description for PF02519.5 was found.

Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.

    MCM
Score
GO
Score
GO
Term
SCOP
Match
SCOP Description
View Download 0.686 N/A N/A d.218.1 Nucleotidyltransferase
View Download 0.642 N/A N/A d.109.1 Actin depolymerizing proteins
View Download 0.584 N/A N/A d.109.1 Actin depolymerizing proteins
View Download 0.567 N/A N/A d.218.1 Nucleotidyltransferase
View Download 0.539 N/A N/A a.40.1 Calponin-homology domain, CH-domain
View Download 0.539 N/A N/A a.40.1 Calponin-homology domain, CH-domain
View Download 0.505 N/A N/A d.327.1 Description not found.
View Download 0.470 N/A N/A d.58.3 Protease propeptides/inhibitors
View Download 0.470 N/A N/A d.58.3 Protease propeptides/inhibitors
View Download 0.443 N/A N/A a.181.1 Antibiotic binding domain of TipA-like multidrug resistance regulators
View Download 0.439 N/A N/A d.110.4 SNARE-like
View Download 0.353 N/A N/A d.34.1 DNA-binding domain of Mlu1-box binding protein MBP1
View Download 0.349 N/A N/A d.214.1 Hypothetical protein MTH1880
View Download 0.334 N/A N/A d.110.4 SNARE-like
View Download 0.332 N/A N/A c.52.2 tRNA splicing endonuclease, C-terminal domain


YRC Informatics Platform - Version 3.0
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