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View Structure Prediction Details

Protein: LEA31_ARATH
Organism: Arabidopsis thaliana
Length: 262 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for LEA31_ARATH.

Description E-value Query
Range
Subject
Range
gi|6648964 - gi|6648964|gb|AAF21310.1| seed maturation protein PM24 [Glycine max]
344.0 [0..4] [260..3]

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Predicted Domain #1
Region A:
Residues: [1-120]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSQEEQPKRP QEPVTYGDVF EVSGELADKP IAPEDANMMQ AAETRVFGHT QKGGAAAVMQ  60
   61 SAATANKRGG FVHPGDTTDL AAERGVTVAQ TDVPGARVTT EFVGGQVVGQ YVEPRPVATA 120
  121 

[Run NCBI BLAST on this sequence.]

Detection Method: Pfam
Confidence: 32.481486
Match: PF04927.3
Description: No description for PF04927.3 was found.

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #2
Region A:
Residues: [121-195]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 AAMEAEVVGL SLQSAITIGE ALEATVQTAG NKPVDQSDAA AIQAAEVRAC GTNVIAPGGI  60
   61 AASAQSAANH NATID

[Run NCBI BLAST on this sequence.]

Detection Method: Pfam
Confidence: 30.309804
Match: PF04927.3
Description: No description for PF04927.3 was found.

Shown below is our most confident prediction for this domain.
Click here to view all matches.

    MCM
Score
GO
Score
GO
Term
SCOP
Match
SCOP Description
View Download 0.864 N/A N/A a.39.1 EF-hand

Predicted Domain #3
Region A:
Residues: [196-262]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 RDEDKIKLID VLAGATGKLA ADKAVTRQDA EGVVSAELRN NPNLSTHPGG VAASITAAAR  60
   61 LNERADI

[Run NCBI BLAST on this sequence.]

Detection Method: Pfam
Confidence: 27.638272
Match: PF04927.3
Description: No description for PF04927.3 was found.

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.


YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle