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View Structure Prediction Details

Protein: STN8_ARATH
Organism: Arabidopsis thaliana
Length: 495 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for STN8_ARATH.

Description E-value Query
Range
Subject
Range
gi|92700087, gi|... - gi|92700087|dbj|BAB18271.2| mitogen-activated protein kinase [Chlamydomonas reinhardtii], gi|1594844...
276.0 [0..77] [494..4]

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Predicted Domain #1
Region A:
Residues: [1-495]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MASLLSPATP TATSAAFHSC STAGFSTPTH ISSQNSSLSL LSRRGCMMRC SFSPQDIPVD  60
   61 SLSHLPPFLD FQNSLATFSD TQKWGFFVSA GIVWFYLTAR PGVLIGAIDA YLLAPLQLGL 120
  121 DTLIGRRLKR SDFLVTEKLG EGSFGVVYAG VLLPKNSTLV DDVRVSKARA KAMDFTGEFK 180
  181 QRVILKKVKV GVRGAEEFGE YEEWFNYRLS RAAPDTCAEF LGSFVADKTN TMFTKGGKWL 240
  241 VWRFEGDRDL ADYMKDRSFP SNLESIMFGR VLQGVESVKR RALIIKQIMR QIITSLRKIH 300
  301 GTGIVHRDVK PANLVVTKKG QIKLIDFGAA ADLRIGKNYI PERTLLDPDY CPPELYVLPE 360
  361 ETPSPPPEPI AALLSPILWQ LNSPDLFDMY SAGIVLLQMA VPTLRSTAGL KNFNLEIKSV 420
  421 EYDLNRWRER TRTRPDLSIL DLDSGRGWDL VTKLISERGS LRRGRLSAAA ALRHPYFLLG 480
  481 GDQAAAVLSK LSFSK

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 61.69897
Match: 2ptkA
Description: CHICKEN SRC TYROSINE KINASE
Matching Structure (courtesy of the PDB):

Predicted functions:

Term Confidence Notes
catalytic activity 0.686492203566958 bayes_pls_golite062009
transferase activity 0.66841261245817 bayes_pls_golite062009
transferase activity, transferring phosphorus-containing groups 0.66326000691279 bayes_pls_golite062009
kinase activity 0.65753777854807 bayes_pls_golite062009
phosphotransferase activity, alcohol group as acceptor 0.64444215862273 bayes_pls_golite062009
protein kinase activity 0.56587465829201 bayes_pls_golite062009
binding 0.0554152720226 bayes_pls_golite062009

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle