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View Structure Prediction Details

Protein: GDL76_ARATH
Organism: Arabidopsis thaliana
Length: 389 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for GDL76_ARATH.

Description E-value Query
Range
Subject
Range
gi|3328240, gi|2... - gi|3328240|gb|AAC26810.1| early nodule-specific protein [Medicago truncatula], pir||T52338 early nod...
328.0 [0..5] [389..1]

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Predicted Domain #1
Region A:
Residues: [1-389]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKDNLERAKL MVSSTVFSWL LLCLFAVTTS VSVQPTCTFP AIYNFGDSNS DTGGISAAFE  60
   61 PIRDPYGQGF FHRPTGRDSD GRLTIDFIAE RLGLPYLSAY LNSLGSNFRH GANFATGGST 120
  121 IRRQNETIFQ YGISPFSLDM QIAQFDQFKA RSALLFTQIK SRYDREKLPR QEEFAKALYT 180
  181 FDIGQNDLSV GFRTMSVDQL KATIPDIVNH LASAVRNIYQ QGGRTFWVHN TGPFGCLPVN 240
  241 MFYMGTPAPG YLDKSGCVKA QNEMAMEFNR KLKETVINLR KELTQAAITY VDVYTAKYEM 300
  301 MSNPKKLGFA NPLKVCCGYH EKYDHIWCGN KGKVNNTEIY GGSCPNPVMA VSWDGVHYTE 360
  361 AANKHVADRT LNGLLTDPPV PITRACYRQ

[Run NCBI BLAST on this sequence.]

Detection Method: FFAS03
Confidence: 2.16
Match: 1escA
Description: THE MOLECULAR MECHANISM OF ENANTIORECOGNITION BY ESTERASES
Matching Structure (courtesy of the PDB):

Predicted functions:

Term Confidence Notes
binding 0.471286748048633 bayes_pls_golite062009
catalytic activity 0.319044203629006 bayes_pls_golite062009
protein binding 0.0277911089352154 bayes_pls_golite062009

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle