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View Structure Prediction Details

Protein: PXN_ARATH
Organism: Arabidopsis thaliana
Length: 331 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for PXN_ARATH.

Description E-value Query
Range
Subject
Range
gi|114674911 - gi|114674911|ref|XP_524071.2| PREDICTED: solute carrier family 25, member 23 [Pan troglodytes]
272.0 [0..5] [322..367]

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Predicted Domain #1
Region A:
Residues: [1-331]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSDALINGLA GAGGGIIAQL LTYPLQTVNT RQQTERDLKR EKRKLGTIEH MCQVVKQEGW  60
   61 ERLYGGLAPS LAGTAASQGV YYYFYQVFRN RAEATALARK KKGLGDGSVG MFASLLVAAF 120
  121 AGSVNVLMTN PIWVIVTRMQ THRKMTKDQT AAPESPSSNA EALVAVEPRP YGTFNTIREV 180
  181 YDEAGITGFW KGVIPTLIMV SNPSMQFMLY ETMLTKLKKK RALKGSNNVT ALETFLLGAV 240
  241 AKLGATVTTY PLLVVKSRLQ AKQVTTGDKR QQYKGTLDAI LKMIRYEGLY GFYKGMSTKI 300
  301 VQSVLAAAVL FMIKEELVKG AKLLLSNATS S

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 70.0
Match: 1okcA
Description: structure of mitochondrial ADP/ATP carrier in complex with carboxyatractyloside
Matching Structure (courtesy of the PDB):

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle