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View Structure Prediction Details

Protein: CCR2_ARATH
Organism: Arabidopsis thaliana
Length: 332 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for CCR2_ARATH.

Description E-value Query
Range
Subject
Range
gi|41205692 - gi|41205692|gb|AAR99612.1| dTDP-glucose 4,6-dehydratase [Geobacillus stearothermophilus]
291.0 [0..1] [319..1]

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Predicted Domain #1
Region A:
Residues: [1-332]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MLVDGKLVCV TGAGGYIASW IVKLLLERGY TVRGTVRNPT DPKNNHLREL QGAKERLTLH  60
   61 SADLLDYEAL CATIDGCDGV FHTASPMTDD PETMLEPAVN GAKFVIDAAA KAKVKRVVFT 120
  121 SSIGAVYMNP NRDTQAIVDE NCWSDLDFCK NTKNWYCYGK MLAEQSAWET AKAKGVDLVV 180
  181 LNPVLVLGPP LQSAINASLV HILKYLTGSA KTYANLTQVY VDVRDVALGH VLVYEAPSAS 240
  241 GRYILAETAL HRGEVVEILA KFFPEYPLPT KCSDEKNPRA KPYKFTTQKI KDLGLEFKPI 300
  301 KQSLYESVKS LQEKGHLPLP QDSNQNEVII ES

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 55.69897
Match: 2c29D
Description: No description for 2c29D was found.

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle