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View Structure Prediction Details

Protein: CAF1A_ARATH
Organism: Arabidopsis thaliana
Length: 360 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for CAF1A_ARATH.

Description E-value Query
Range
Subject
Range
gi|67901282, gi|... - gi|67901282|ref|XP_680897.1| hypothetical protein AN7628.2 [Aspergillus nidulans FGSC A4], ref|XP_41...
373.0 [0..8] [319..137]

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Predicted Domain #1
Region A:
Residues: [1-360]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MNEIHQPLAR RVWRSNVDEE MARMAECLKR FPLIAFDTEY PGIIFRTYFD SSSDECYRAM  60
   61 KGNVENTKLI QCGFTLFNAK GEIGGVWEIN FSNFGDPSDT RNELSIEFLR RHGLDLQKIR 120
  121 DEGVDMFGYG FFPKLMTVFR SQKHVEFVTF QGAYDFAYFL SILNHGKLPE THGEFATEVV 180
  181 KVFGQVYDTK VMAGFCEGLG EHLGLSKLAQ LLQITRVGRA HHAGSDSLMT ALVFIKLKHV 240
  241 YEDSRFARGL IYGIGKSNLV AAPAPAPVPE PTLPLMCQQN VASYPVFHNG YVQNYEQPQL 300
  301 VSYDPSGAPW AFCNATGTYV QLTHLPASTF AYPSQTPSAT VDYLGPVPNY YNNNACYVVE 360
  361 

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Detection Method: PSI-BLAST
Confidence: 85.522879
Match: 2p51A
Description: No description for 2p51A was found.

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle