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View Structure Prediction Details

Protein: GLTP1_ARATH
Organism: Arabidopsis thaliana
Length: 202 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for GLTP1_ARATH.

Description E-value Query
Range
Subject
Range
gi|22296432, gi|... - gi|34901156|ref|NP_911924.1| hypothetical protein [Oryza sativa (japonica cultivar-group)], gi|22296...
233.0 [0..1] [202..1]

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Predicted Domain #1
Region A:
Residues: [1-202]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MEGTVFTPCL EGMKHVKSDQ GEMLTKPFLE LCKTILPVID KFGAAMTLVK SDIGGNITRL  60
   61 EKNYLSDPDK FKYLYTFVQV EIESKIAKGS SSCTNGLLWL TRAMDFLVEL FRNLVAHQDW 120
  121 SMPQACADSY QKTLKKWHGW LASSTFSMAL KLAPDRKKFM DVISGSGNIQ ADMERFCAEF 180
  181 GPFLHDNHKF LASVGMDDMK AS

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 51.0
Match: 1tfjA
Description: Crystal structure of Bovine Glycolipid transfer protein in complex with a fatty acid
Matching Structure (courtesy of the PDB):

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle