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View Structure Prediction Details

Protein: B3GT6_ARATH
Organism: Arabidopsis thaliana
Length: 399 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for B3GT6_ARATH.

Description E-value Query
Range
Subject
Range
gi|21360399, gi|... - pir||A86186 hypothetical protein [imported] - Arabidopsis thaliana, gi|2388580|gb|AAB71461.1| Simil...
337.0 [0..5] [399..6]

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Predicted Domain #1
Region A:
Residues: [1-120]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MGMGRYQKSA TSGVSARWVF VLCISSFLLG VLVVNRLLAS FETVDGIERA SPEQNDQSRS  60
   61 LNPLVDCESK EGDILSRVSH THDVIKTLDK TISSLEVELA TARAARSDGR DGSPAVAKTV 120
  121 

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #2
Region A:
Residues: [121-399]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 ADQSKIRPRM FFVMGIMTAF SSRKRRDSIR GTWLPKGDEL KRLETEKGII MRFVIGHSSS  60
   61 PGGVLDHTIE AEEEQHKDFF RLNHIEGYHE LSSKTQIYFS SAVAKWDADF YIKVDDDVHV 120
  121 NLGMLGSTLA RHRSKPRVYI GCMKSGPVLA QKGVKYHEPE YWKFGEEGNK YFRHATGQIY 180
  181 AISKDLATYI SVNRQLLHKY ANEDVSLGSW FIGLDVEHID DRSLCCGTPL DCEWKGQAGN 240
  241 PCAASFDWSC SGICKSVDRM LEVHQRCGEG DGAIWHSSF

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 24.522879
Match: 2j0aA
Description: No description for 2j0aA was found.

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle