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View Structure Prediction Details

Protein: USPL1_ARATH
Organism: Arabidopsis thaliana
Length: 280 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for USPL1_ARATH.

Description E-value Query
Range
Subject
Range
BNM2A_BRANA - BURP domain-containing protein BNM2A OS=Brassica napus GN=BNM2A PE=2 SV=1
394.0 [0..3] [280..2]

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Predicted Domain #1
Region A:
Residues: [1-165]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MASTFRLSIS FLTLILFSLW VVEAHTSRKL ISIKEKEGQD ISHLLKDGEF DDPSLYMYFT  60
   61 LNDLKLGTKL LIYFYKNDLQ KLPPLLTRQQ ADLIPFTKSK LDFLLDHFSI TKDSPQGKAI 120
  121 KETLGHCDAK AIEGEHKFCG TSLESLIDLV KKTMGYNVDL KVMTT

[Run NCBI BLAST on this sequence.]

Detection Method: Pfam
Confidence: 5.431798
Match: PF03181.6
Description: No description for PF03181.6 was found.

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #2
Region A:
Residues: [166-280]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 KVMVPAQNSI SYALHNYTFV EAPKELVGIK MLGCHRMPYP YAVYYCHGHK GGSRVFEVNL  60
   61 VTDDGRQRVV GPAVCHMDTS TWDADHVAFK VLKMEPRSAP VCHFFPLDNI VWVTK

[Run NCBI BLAST on this sequence.]

Detection Method: FFAS03
Confidence: 1.09
Match: 1w7oA
Description: cytochrome c3 from Desulfomicrobium baculatus
Matching Structure (courtesy of the PDB):

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