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View Structure Prediction Details

Protein: CRK9_ARATH
Organism: Arabidopsis thaliana
Length: 265 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for CRK9_ARATH.

Description E-value Query
Range
Subject
Range
gi|3021268, gi|7... - pir||T04833 hypothetical protein F21P8.50 - Arabidopsis thaliana, gi|7269163|emb|CAB79271.1| putativ...
297.0 [0..21] [257..618]

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Predicted Domain #1
Region A:
Residues: [1-76]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSSLISFIFL FLFSFLTSFK ASAQDPFYLN HYCPNTTTYS RFSTYSTNLR TLLSSFASRN  60
   61 ASYSTGFQNV TVGQTP

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.

Found no structure predictions for this domain.

Predicted Domain #2
Region A:
Residues: [77-176]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 DLVTGLFLCR GDLSPEVCSN CVAFSVDEAL TRCPSQREAV FYYEECILRY SDKNILSTAI  60
   61 TNEGEFILSN TNTISPNQSQ INQFIVLVQS NMNQAAMEAA 

[Run NCBI BLAST on this sequence.]

Detection Method: Pfam
Confidence: 24.036212
Match: PF01657.7
Description: No description for PF01657.7 was found.

Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.

    MCM
Score
GO
Score
GO
Term
SCOP
Match
SCOP Description
View Download 0.806 N/A N/A c.37.1 P-loop containing nucleoside triphosphate hydrolases
View Download 0.806 N/A N/A c.37.1 P-loop containing nucleoside triphosphate hydrolases
View Download 0.745 N/A N/A c.23.14 Nucleoside 2-deoxyribosyltransferase
View Download 0.745 N/A N/A c.92.1 Chelatase
View Download 0.728 N/A N/A d.240.1 Description not found.
View Download 0.723 N/A N/A d.240.1 Description not found.
View Download 0.675 N/A N/A d.15.6 Superantigen toxins, C-terminal domain
View Download 0.663 N/A N/A c.51.2 TolB, N-terminal domain
View Download 0.622 N/A N/A c.95.1 Thiolase-like

Predicted Domain #3
Region A:
Residues: [177-265]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 NSSRKFSTIK TELTELQTLY GLVQCTPDLT SQDCLRCLTR SINRMPLSRI GARQFWPSCN  60
   61 SRYELYSFYN ETTIGTPSPP PPPSPSRAN

[Run NCBI BLAST on this sequence.]

Detection Method: Pfam
Confidence: 23.408935
Match: PF01657.7
Description: No description for PF01657.7 was found.

Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.

    MCM
Score
GO
Score
GO
Term
SCOP
Match
SCOP Description
View Download 0.911 N/A N/A b.1.1 Immunoglobulin
View Download 0.904 N/A N/A d.58.18 Regulatory domain in the aminoacid metabolism
View Download 0.820 N/A N/A d.95.2 Homing endonucleases
View Download 0.820 N/A N/A d.95.2 Homing endonucleases
View Download 0.789 N/A N/A d.95.2 Homing endonucleases
View Download 0.789 N/A N/A d.95.2 Homing endonucleases
View Download 0.755 N/A N/A d.109.1 Actin depolymerizing proteins
View Download 0.741 N/A N/A d.95.2 Homing endonucleases
View Download 0.680 N/A N/A b.1.1 Immunoglobulin
View Download 0.671 N/A N/A b.1.1 Immunoglobulin
View Download 0.480 N/A N/A d.74.1 Pterin-4a-carbinolamine dehydratase (PCD)/dimerization cofactor of HNF1 (DCoH)
View Download 0.456 N/A N/A d.74.1 Pterin-4a-carbinolamine dehydratase (PCD)/dimerization cofactor of HNF1 (DCoH)
View Download 0.437 N/A N/A d.52.8 Description not found.
View Download 0.398 N/A N/A c.47.1 Thioredoxin-like
View Download 0.389 N/A N/A d.88.1 SRF-like


YRC Informatics Platform - Version 3.0
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