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View Structure Prediction Details

Protein: DTX55_ARATH
Organism: Arabidopsis thaliana
Length: 502 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for DTX55_ARATH.

Description E-value Query
Range
Subject
Range
gi|113548993, gi... - gi|115453843|ref|NP_001050522.1| Os03g0571900 [Oryza sativa (japonica cultivar-group)], gi|113548993...
335.0 [0..17] [487..636]

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Predicted Domain #1
Region A:
Residues: [1-245]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MVVEEDSRLI NLQHKYNPTM PEVVEELKRI WDISFPVAAM SILNYLKNMT SVVCMGRLGS  60
   61 LELAGGALAI GFTNITGYSV LSGLATGMEP LCGQAIGSKN PSLASLTLKR TIFLLLLASL 120
  121 PISLLWLNLA PLMLMLRQQH DITRVASLYC SFSLPDLLAN SFLHPLRIYL RCKGTTWPLM 180
  181 WCTLVSVLLH LPITAFFTFY ISLGVPGVAV SSFLTNFISL SLLLCYIYLE NNNNDKTTSK 240
  241 SLCLD

[Run NCBI BLAST on this sequence.]

Detection Method: Pfam
Confidence: 30.420216
Match: PF01554.9
Description: No description for PF01554.9 was found.

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #2
Region A:
Residues: [246-502]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 TPLMLYGSRD SGENDVWSTL VKFAVPSCIA VCLEWWWYEF MTVLAGYLPE PKVALAAAAI  60
   61 VIQTTSLMYT IPTALSAAVS TRVSNELGAG RPEKAKTAAT VAVGAAVAVS VFGLVGTTVG 120
  121 REAWGKVFTA DKVVLELTAA VIPVIGACEL ANCPQTISCG ILRGSARPGI GAKINFYAFY 180
  181 VVGAPVAVVL AFVWGLGFMG LCYGLLGAQL ACAISILTVV YNTDWNKESL KAHDLVGKNV 240
  241 ISPNVDQIIV KCEEGLH

[Run NCBI BLAST on this sequence.]

Detection Method: Pfam
Confidence: 42.337242
Match: PF01554.9
Description: No description for PF01554.9 was found.

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.


YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle