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View Structure Prediction Details

Protein: AZF2_ARATH
Organism: Arabidopsis thaliana
Length: 273 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for AZF2_ARATH.

Description E-value Query
Range
Subject
Range
gi|73947291 - gi|73947291|ref|XP_541354.2| PREDICTED: similar to Zinc finger protein 606 (Zinc finger protein 328)...
438.0 [0..4] [272..2585]

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Predicted Domain #1
Region A:
Residues: [1-191]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MALEAMNTPT SSFTRIETKE DLMNDAVFIE PWLKRKRSKR QRSHSPSSSS SSPPRSRPKS  60
   61 QNQDLTEEEY LALCLLMLAK DQPSQTRFHQ QSQSLTPPPE SKNLPYKCNV CEKAFPSYQA 120
  121 LGGHKASHRI KPPTVISTTA DDSTAPTISI VAGEKHPIAA SGKIHECSIC HKVFPTGQAL 180
  181 GGHKRCHYEG N

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 62.0
Match: 2i13A
Description: No description for 2i13A was found.

Predicted Domain #2
Region A:
Residues: [192-273]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 LGGGGGGGSK SISHSGSVSS TVSEERSHRG FIDLNLPALP ELSLHHNPIV DEEILSPLTG  60
   61 KKPLLLTDHD QVIKKEDLSL KI

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 8.39794
Match: 1x6hA
Description: Solution structures of the C2H2 type zinc finger domain of human Transcriptional repressor CTCF
Matching Structure (courtesy of the PDB):

Predicted functions:

Term Confidence Notes
binding 0.414217765611205 bayes_pls_golite062009

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