| Protein: | NCED2_ARATH |
| Organism: | Arabidopsis thaliana |
| Length: | 583 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for NCED2_ARATH.
| Description | E-value | Query Range |
Subject Range |
|
|
713.0 | [0..22] | [582..43] |
|
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710.0 | [0..22] | [582..43] |
|
|
709.0 | [0..12] | [582..7] |
|
|
700.0 | [0..7] | [582..13] |
|
|
698.0 | [0..18] | [582..41] |
|
|
695.0 | [0..12] | [582..22] |
|
|
695.0 | [0..12] | [582..22] |
|
Region A: Residues: [1-92] |
1 11 21 31 41 51
| | | | | |
1 MVSLLTMPMS GGIKTWPQAQ IDLGFRPIKR QPKVIKCTVQ IDVTELTKKR QLFTPRTTAT 60
61 PPQHNPLRLN IFQKAAAIAI DAAERALISH EQ
|
| Detection Method: |  |
Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.
| MCM Score |
SCOP Match |
SCOP Description | ||
| View | Download | 0.500 | a.8.11 | Description not found. |
| View | Download | 0.457 | d.129.6 | Description not found. |
| View | Download | 0.389 | a.54.1 | Domain of early E2A DNA-binding protein, ADDBP |
| View | Download | 0.387 | d.58.12 | eEF-1beta-like |
| View | Download | 0.387 | d.58.12 | eEF-1beta-like |
| View | Download | 0.367 | a.47.2 | t-snare proteins |
| View | Download | 0.354 | d.52.7 | Ribosome-binding factor A, RbfA |
| View | Download | 0.344 | d.52.8 | Description not found. |
| View | Download | 0.333 | a.7.7 | BAG domain |
| View | Download | 0.316 | d.52.8 | Description not found. |
| View | Download | 0.314 | d.108.1 | Acyl-CoA N-acyltransferases (Nat) |
| View | Download | 0.314 | d.108.1 | Acyl-CoA N-acyltransferases (Nat) |
| View | Download | 0.311 | a.4.5 | "Winged helix" DNA-binding domain |
| View | Download | 0.293 | d.52.8 | Description not found. |
|
Region A: Residues: [93-583] |
1 11 21 31 41 51
| | | | | |
1 DSPLPKTADP RVQIAGNYSP VPESSVRRNL TVEGTIPDCI DGVYIRNGAN PMFEPTAGHH 60
61 LFDGDGMVHA VKITNGSASY ACRFTKTERL VQEKRLGRPV FPKAIGELHG HSGIARLMLF 120
121 YARGLCGLIN NQNGVGVANA GLVYFNNRLL AMSEDDLPYQ LKITQTGDLQ TVGRYDFDGQ 180
181 LKSAMIAHPK LDPVTKELHA LSYDVVKKPY LKYFRFSPDG VKSPELEIPL ETPTMIHDFA 240
241 ITENFVVIPD QQVVFKLGEM ISGKSPVVFD GEKVSRLGIM PKDATEASQI IWVNSPETFC 300
301 FHLWNAWESP ETEEIVVIGS CMSPADSIFN ERDESLRSVL SEIRINLRTR KTTRRSLLVN 360
361 EDVNLEIGMV NRNRLGRKTR FAFLAIAYPW PKVSGFAKVD LCTGEMKKYI YGGEKYGGEP 420
421 FFLPGNSGNG EENEDDGYIF CHVHDEETKT SELQIINAVN LKLEATIKLP SRVPYGFHGT 480
481 FVDSNELVDQ L
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| Detection Method: | |
| Confidence: | 119.0 |
| Match: | 2biwA |
| Description: | Crystal structure of apocarotenoid cleavage oxygenase from Synechocystis, native enzyme |
Matching Structure (courtesy of the PDB): |
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