YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

View Structure Prediction Details

Protein: gi|23397192, gi|...
Organism: Arabidopsis thaliana
Length: 169 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



[What does the above image mean?]


[Show Ginzu Version Information]


Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|23397192, gi|....

Description E-value Query
Range
Subject
Range
gi|85118928 - gi|85118928|ref|XP_965543.1| hypothetical protein NCU01912 [Neurospora crassa OR74A]
gi|32417248, gi|... - gi|32417248|ref|XP_329102.1| hypothetical protein [Neurospora crassa], gi|28927353|gb|EAA36307.1| hy...
126.0 [0..4] [168..994]

Back

Predicted Domain #1
Region A:
Residues: [1-169]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MASHQEQSYK AGETRGKAQE KTGEAMGTMG DKTQAAKDKT QETAQSAQQK AHETAQSAKD  60
   61 KTSQAAQTTQ ERAQESKDKT GSYMSETGEA IKNKAHDAAE YTKETAEAGK EKTSGILGQT 120
  121 GEQVKQMAMG ATDAVKHTLG LRTDEGNKEH VSSAPSTTTT TTTRETQRK

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 3.69897
Match: 1ej6B
Description: Reovirus core
Matching Structure (courtesy of the PDB):

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle