YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

View Structure Prediction Details

Protein: PUMP2_ARATH
Organism: Arabidopsis thaliana
Length: 305 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



[What does the above image mean?]


[Show Ginzu Version Information]


Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for PUMP2_ARATH.

Description E-value Query
Range
Subject
Range
gi|74006830 - gi|74006830|ref|XP_537947.2| PREDICTED: similar to ADP/ATP translocase 3 (Adenine nucleotide translo...
300.0 [0..6] [298..174]

Back

Predicted Domain #1
Region A:
Residues: [1-305]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MADFKPRIEI SFLETFICSA FAACFAELCT IPLDTAKVRL QLQRKIPTGD GENLPKYRGS  60
   61 IGTLATIARE EGISGLWKGV IAGLHRQCIY GGLRIGLYEP VKTLLVGSDF IGDIPLYQKI 120
  121 LAALLTGAIA IIVANPTDLV KVRLQSEGKL PAGVPRRYAG AVDAYFTIVK LEGVSALWTG 180
  181 LGPNIARNAI VNAAELASYD QIKETIMKIP FFRDSVLTHL LAGLAAGFFA VCIGSPIDVV 240
  241 KSRMMGDSTY RNTVDCFIKT MKTEGIMAFY KGFLPNFTRL GTWNAIMFLT LEQVKKVFLR 300
  301 EVLYD

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 77.69897
Match: 1okcA
Description: structure of mitochondrial ADP/ATP carrier in complex with carboxyatractyloside
Matching Structure (courtesy of the PDB):

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle