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View Structure Prediction Details

Protein: gi|1592681, gi|1...
Organism: Arabidopsis thaliana
Length: 97 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|1592681, gi|1....

Description E-value Query
Range
Subject
Range
gi|11612201 - gi|11612201|gb|AAG37453.1| seed maturation protein LEA 4 [Glycine tomentella]
96.0 [0..2] [91..9]
gi|445632, gi|16... - pir||S19831 seed maturation protein - soybean, gi|445632|prf||1909377A maturation protein GmPM9, gi...
gi|1079650 - gi|1079650|gb|AAD09208.1| late embryogenesis abundant protein [Glycine soja]
88.0 [0..2] [97..9]
gi|82394558 - gi|82394558|gb|ABB72368.1| seed maturation protein [Glycine tabacina]
83.0 [0..1] [92..1]
gi|82394548 - gi|82394548|gb|ABB72363.1| seed maturation protein [Glycine canescens]
82.0 [0..1] [92..1]
gi|82394556, gi|... - gi|82394556|gb|ABB72367.1| seed maturation protein [Glycine soja], gi|82394554|gb|ABB72366.1| seed m...
82.0 [0..1] [92..1]

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Predicted Domain #1
Region A:
Residues: [1-97]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MQSAKEKISD MASTAKEKLN IGGAKAQGHA EKTMARTKKE KKLAQEREKS KEAQAKADLH  60
   61 QSKAEHAADA QVHGHHLPGH STYPTRATGA NYPPGQI

[Run NCBI BLAST on this sequence.]

Detection Method: Pfam
Confidence: 35.49485
Match: PF03760.6
Description: No description for PF03760.6 was found.

Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.

    MCM
Score
GO
Score
GO
Term
SCOP
Match
SCOP Description
View Download 0.743 N/A N/A a.204.1 Description not found.
View Download 0.624 N/A N/A a.7.6 Ribosomal protein S20
View Download 0.581 N/A N/A a.204.1 Description not found.
View Download 0.538 N/A N/A a.7.16 Description not found.
View Download 0.517 N/A N/A a.29.16 Description not found.
View Download 0.473 N/A N/A a.7.6 Ribosomal protein S20
View Download 0.438 N/A N/A f.17.1 F1F0 ATP synthase subunit C
View Download 0.309 N/A N/A a.7.7 BAG domain
View Download 0.254 N/A N/A c.78.2 Aspartate/glutamate racemase


YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle