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View Structure Prediction Details

Protein: DOF17_ARATH
Organism: Arabidopsis thaliana
Length: 194 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for DOF17_ARATH.

Description E-value Query
Range
Subject
Range
gi|15027981 - gi|15027981|gb|AAK76521.1| putative Dof zinc finger protein [Arabidopsis thaliana]
235.0 [0..9] [194..5]

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Predicted Domain #1
Region A:
Residues: [1-107]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MQDLTSAAAY YHQSMMMTTA KQNQPELPEQ EQLKCPRCDS PNTKFCYYNN YNLSQPRHFC  60
   61 KNCRRYWTKG GALRNIPVGG GTRKSNKRSG SSPSSNLKNQ TVAEKPD

[Run NCBI BLAST on this sequence.]

Detection Method: FFAS03
Confidence: 1.04
Match: 1jocA
Description: Eea1; Eea1 homodimerisation domain
Matching Structure (courtesy of the PDB):

Predicted Domain #2
Region A:
Residues: [108-194]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 HHGSGSEEKE ERVSGQEMNP TRMLYGLPVG DPNGASFSSL LASNMQMGGL VYESGSRWLP  60
   61 GMDLGLGSVR RSDDTWTDLA MNRMEKN

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.


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Created and Maintained by: Michael Riffle