| Protein: | ANT_ARATH |
| Organism: | Arabidopsis thaliana |
| Length: | 555 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for ANT_ARATH.
| Description | E-value | Query Range |
Subject Range |
|
|
548.0 | [0..1] | [555..1] |
|
Region A: Residues: [1-251] |
1 11 21 31 41 51
| | | | | |
1 MKSFCDNDDN NHSNTTNLLG FSLSSNMMKM GGRGGREAIY SSSTSSAATS SSSVPPQLVV 60
61 GDNTSNFGVC YGSNPNGGIY SHMSVMPLRS DGSLCLMEAL NRSSHSNHHQ DSSPKVEDFF 120
121 GTHHNNTSHK EAMDLSLDSL FYNTTHEPNT TTNFQEFFSF PQTRNHEEET RNYGNDPSLT 180
181 HGGSFNVGVY GEFQQSLSLS MSPGSQSSCI TGSHHHQQNQ NQNHQSQNHQ QISEALVETS 240
241 VGFETTTMAA A
|
| Detection Method: |  |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [252-358] |
1 11 21 31 41 51
| | | | | |
1 KKKRGQEDVV VVGQKQIVHR KSIDTFGQRT SQYRGVTRHR WTGRYEAHLW DNSFKKEGHS 60
61 RKGRQVYLGG YDMEEKAARA YDLAALKYWG PSTHTNFSAE NYQKEIE
|
| Detection Method: | |
| Confidence: | 3.69 |
| Match: | 2gccA |
| Description: | SOLUTION STRUCTURE OF THE GCC-BOX BINDING DOMAIN, NMR, MINIMIZED MEAN STRUCTURE |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| binding | 0.236830846471166 | bayes_pls_golite062009 |
|
Region A: Residues: [359-470] |
1 11 21 31 41 51
| | | | | |
1 DMKNMTRQEY VAHLRRKSSG FSRGASIYRG VTRHHQHGRW QARIGRVAGN KDLYLGTFGT 60
61 QEEAAEAYDV AAIKFRGTNA VTNFDITRYD VDRIMSSNTL LSGELARRNN NS
|
| Detection Method: | |
| Confidence: | 23.522879 |
| Match: | 1gccA |
| Description: | GCC-box binding domain |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| binding | 0.339357445627225 | bayes_pls_golite062009 |
|
Region A: Residues: [471-555] |
1 11 21 31 41 51
| | | | | |
1 IVVRNTEDQT ALNAVVEGGS NKEVSTPERL LSFPAIFALP QVNQKMFGSN MGGNMSPWTS 60
61 NPNAELKTVA LTLPQMPVFA AWADS
|
| Detection Method: | |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
