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View Structure Prediction Details

Protein: CSLD3_ARATH
Organism: Arabidopsis thaliana
Length: 1145 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

No multiple sequence alignment data found for CSLD3_ARATH.

Predicted Domain #1
Region A:
Residues: [1-104]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MASNNHFMNS RSNLSTNSDA AEAERHQQPV SNSVTFARRT PSGRYVNYSR DDLDSELGSV  60
   61 DLTGYSVHIP PTPDNQPMDP SISQKVEEQY VSNSLFTGGF NSVT

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.

Found no structure predictions for this domain.

Predicted Domain #2
Region A:
Residues: [105-267]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 RAHLMEKVID TETSHPQMAG AKGSSCAVPG CDVKVMSDER GQDLLPCECD FKICRDCFMD  60
   61 AVKTGGMCPG CKEPYRNTDL ADFADNNKQQ RPMLPPPAGG SKMDRRLSLM KSTKSGLMRS 120
  121 QTGDFDHNRW LFETSGTYGF GNAFWTKDGN FGSDKDGNGH GMG

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 23.221849
Match: 1weoA
Description: Solution structure of RING-finger in the catalytic subunit (IRX3) of cellulose synthase
Matching Structure (courtesy of the PDB):

Predicted Domain #3
Region A:
Residues: [268-314]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 PQDLMSRPWR PLTRKLQIPA AVISPYRLLI LIRIVVLALF LMWRIKH

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.

Found no structure predictions for this domain.

Predicted Domain #4
Region A:
Residues: [315-436]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 KNPDAIWLWG MSVVCELWFA LSWLLDQLPK LCPINRATDL NVLKEKFETP TPSNPTGKSD  60
   61 LPGLDMFVST ADPEKEPPLV TSNTILSILA ADYPVEKLAC YVSDDGGALL TFEAMAEAAS 120
  121 FA

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.

Found no structure predictions for this domain.

Predicted Domain #5
Region A:
Residues: [437-668]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 NMWVPFCRKH NIEPRNPDSY FSLKRDPYKN KVKADFVKDR RRVKREYDEF KVRINSLPDS  60
   61 IRRRSDAYHA REEIKAMKLQ RQNRDEEIVE PVKIPKATWM ADGTHWPGTW INSGPDHSRS 120
  121 DHAGIIQVML KPPSDEPLHG VSEGFLDLTD VDIRLPLLVY VSREKRPGYD HNKKAGAMNA 180
  181 LVRASAIMSN GPFILNLDCD HYIYNSQALR EGMCFMMDRG GDRLCYVQFP QR

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 11.0
Match: 2z87A
Description: No description for 2z87A was found.

Predicted Domain #6
Region A:
Residues: [669-742]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 FEGIDPSDRY ANHNTVFFDV NMRALDGLMG PVYVGTGCLF RRIALYGFDP PRAKEHHPGF  60
   61 CSCCFSRKKK KSRV

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 4.522879
Match: 1h7lA
Description: Spore coat polysaccharide biosynthesis protein SpsA
Matching Structure (courtesy of the PDB):

Predicted Domain #7
Region A:
Residues: [743-811]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 PEENRSLRMG GDSDDDEEMN LSLVPKKFGN STFLIDSIPV AEFQGRPLAD HPAVQNGRPP  60
   61 GALTIPREL

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.

Found no structure predictions for this domain.

Predicted Domain #8
Region A:
Residues: [812-906]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 LDASTVAEAI AVISCWYEDK TEWGSRIGWI YGSVTEDVVT GYRMHNRGWK SVYCVTKRDA  60
   61 FRGTAPINLT DRLHQVLRWA TGSVEIFFSR NNAFF

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.

Found no structure predictions for this domain.

Predicted Domain #9
Region A:
Residues: [907-1145]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 ASPRMKILQR IAYLNVGIYP FTSFFLIVYC FLPALSLFSG QFIVQTLNVT FLVYLLIISI  60
   61 TLCLLALLEI KWSGISLEEW WRNEQFWLIG GTSAHLAAVI QGLLKVVAGI EISFTLTSKS 120
  121 GGEDVDDEFA DLYIVKWTSL MIPPITIMMV NLIAIAVGFS RTIYSVIPQW SKLIGGVFFS 180
  181 FWVLAHLYPF AKGLMGRRGR TPTIVYVWSG LVAITISLLW VAINPPAGST QIGGSFTFP

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.

Found no structure predictions for this domain.


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