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View Structure Prediction Details

Protein: TCP3_ARATH
Organism: Arabidopsis thaliana
Length: 391 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for TCP3_ARATH.

Description E-value Query
Range
Subject
Range
gi|25369267, gi|... - gi|3243274|gb|AAC24010.1| TCP3 [Arabidopsis thaliana], pir||T52182 probable transcription factor TCP...
361.0 [0..19] [391..1]
gi|20269127 - gi|20269127|emb|CAD19990.1| TCP1 protein [Lupinus albus]
279.0 [0..26] [391..17]
gi|33591200 - gi|33591200|gb|AAQ23104.1| cycloidea-like protein group 1A [Lupinus texensis]
250.0 [0..2] [287..47]
gi|37783285 - gi|37783285|gb|AAO43102.1| mutant cincinnata [Antirrhinum majus]
249.0 [0..27] [391..29]
gi|29788727 - gi|29788727|gb|AAP03344.1| CYCLOIDEA-like protein [Maurandya antirrhiniflora]
248.0 [0..5] [258..36]
gi|31296462 - gi|31296462|gb|AAP46519.1| DICHOTOMA-like protein [Antirrhinum leptaleum]
248.0 [0..5] [258..37]
gi|29788725 - gi|29788725|gb|AAP03343.1| CYCLOIDEA-like protein [Lophospermum sp. 91/97]
248.0 [0..5] [258..36]
gi|33591196 - gi|33591196|gb|AAQ23102.1| cycloidea-like protein group 1A [Lupinus cosentinii]
247.0 [0..3] [288..49]

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Predicted Domain #1
Region A:
Residues: [1-168]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAPDNDHFLD SPSPPLLEMR HHQSATENGG GCGEIVEVQG GHIVRSTGRK DRHSKVCTAK  60
   61 GPRDRRVRLS APTAIQFYDV QDRLGFDRPS KAVDWLITKA KSAIDDLAQL PPWNPADTLR 120
  121 QHAAAAANAK PRKTKTLISP PPPQPEETEH HRIGEEEDNE SSFLPASM

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #2
Region A:
Residues: [169-257]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 DSDSIADTIK SFFPVASTQQ SYHHQPPSRG NTQNQDLLRL SLQSFQNGPP FPNQTEPALF  60
   61 SGQSNNQLAF DSSTASWEQS HQSPEFGKI

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #3
Region A:
Residues: [258-391]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 QRLVSWNNVG AAESAGSTGG FVFASPSSLH PVYSQSQLLS QRGPLQSINT PMIRAWFDPH  60
   61 HHHHHHQQSM TTDDLHHHHP YHIPPGIHQS AIPGIAFASS GEFSGFRIPA RFQGEQEEHG 120
  121 GDNKPSSASS DSRH

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.


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