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View Structure Prediction Details

Protein: gi|23308197, gi|...
Organism: Arabidopsis thaliana
Length: 240 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|23308197, gi|....

Description E-value Query
Range
Subject
Range
gi|79436765 - gi|79436765|ref|NP_190351.2| enzyme inhibitor/ pectinesterase/ pectinesterase inhibitor [Arabidopsis...
207.0 [0..1] [240..37]

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Predicted Domain #1
Region A:
Residues: [1-240]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MESINTLKGY DKVSDQENQI HHHHHSPLPK PSSFSRKTLI ATGSVVSLLL ILSVVALTAG  60
   61 AFTHSPPHHP PISSASLKSL CSVTRYPETC FNSLSSSLNE SDSKLNPESI LELSLRVAAK 120
  121 EISNLSISFR SINDMPEDAA VGDCVKLYTD ALSQLNDSIT EIERKKKKGG NNWLTEEVVG 180
  181 DVKTWISAAM TDGETCSDGI EEMGTIVGNE IKKKMEMANQ MMSISLAIVS QMKKLLLIFH 240
  241 

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 20.0
Match: 1xg2B
Description: Crystal structure of the complex between pectin methylesterase and its inhibitor protein
Matching Structure (courtesy of the PDB):

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle