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View Structure Prediction Details

Protein: gi|34098861, gi|...
Organism: Arabidopsis thaliana
Length: 353 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|34098861, gi|....

Description E-value Query
Range
Subject
Range
LGRC_BREPA - Linear gramicidin synthase subunit C OS=Brevibacillus parabrevis GN=lgrC PE=3 SV=1
gi|42820780 - gi|42820780|emb|CAD92851.1| nonribosomal peptide synthetase [Brevibacillus brevis]
260.0 [0..18] [350..3642]

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Predicted Domain #1
Region A:
Residues: [1-353]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 METKIPKSMI AGVQTVMPVE VTQHREIRSV SVVDPVGVGI FRRTVNIVTY YKEAGDSGGE  60
   61 RGWLVAGWIK ESLGRALTEQ PMLSGRLRRR KTAGNDGLEL VANDSGVRMV EAKFPASLPE 120
  121 FLEMAKRDKS RAEAETVFWK DIDEDEPQYS PLFYVQVTNF ESGGYSIGIS CSILIADLFL 180
  181 ETGFLTKWAQ IQSSLAQTTL KPVFHLPSLK QDFGNFLTEF FRSASVLDRG EPIAFRAKTC 240
  241 LKISPACIVT SKRTSGDVFL FIKEQSSGEN STGCDGTKVE IHSSDEVIKG CDCGRDSEET 300
  301 NDGVLDKSLS FGERLEVTSC WVGCVSKGVV FVFPSTFGDA KSLAKFIVAL PKE

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Detection Method: PSI-BLAST
Confidence: 37.221849
Match: 2e1tA
Description: No description for 2e1tA was found.

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle