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View Structure Prediction Details

Protein: gi|15241431, gi|...
Organism: Arabidopsis thaliana
Length: 454 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|15241431, gi|....

Description E-value Query
Range
Subject
Range
gi|83853815 - gi|83853815|gb|ABC47848.1| N-hydroxycinnamoyl/benzoyltransferase 6 [Glycine max]
323.0 [0..1] [451..1]

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Predicted Domain #1
Region A:
Residues: [1-454]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MDSSPSEVKI ISKCFVKPKT IPEKWKEPYH FSPMDHVILS IHYIQKGLLF LKPSFSESVT  60
   61 PKEFMETLLQ KLKDSLAIAL VHFYPLAGRI STLKTNDSRS HSVFVDCNNS PAGFIHAESD 120
  121 LSVSDILGSK YVPLVVQSFF DHHKALSRDG DTMTLLSVKV TELVDGVFIG LSMNHSLGDG 180
  181 SSFWHFFNSL SEIFNSQEDN NKFLCLKNPP IFREVSGPMY SLPFSEPDES ISQSERPVLK 240
  241 ERMFHFSSET VRSLKSKANE ECGTTKISSL QSLTALIWRS ITRARKLPND QETTCRLAAG 300
  301 NRSRMNPPLP MNHFGNYISL VIATTTTGDL LENEFGCAAL KLHQAVTEHT GEKISADMDR 360
  361 WLKAHLKLDG FFSPNIVHMG SSPRFNKYGS EFGMGKAVAV RSGYGGKYDG KVSAYPGREG 420
  421 GASIDLEVCL PPECMEALEL DQEFMSLVSS SSSS

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 49.69897
Match: 2bghA
Description: Crystal structure of Vinorine Synthase
Matching Structure (courtesy of the PDB):

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle