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View Structure Prediction Details

Protein: INVB_ARATH
Organism: Arabidopsis thaliana
Length: 571 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for INVB_ARATH.

Description E-value Query
Range
Subject
Range
CINV2_ARATH - Alkaline/neutral invertase CINV2 OS=Arabidopsis thaliana GN=CINV2 PE=1 SV=1
535.0 [0..12] [571..7]

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Predicted Domain #1
Region A:
Residues: [1-571]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSSFNLSVDV NQNGNIKNVD SLSTLDDIDD IDFAKLLEKP RPLNIDRLRS LDERSLTELT  60
   61 GSPQLRNADN ASRAPDHADY VISPSFGRRS GFNTPRSQPG FESHPMVGEA WDALRRSMVY 120
  121 FRGQPVGTIA AVDNSEEKLN YDQVFVRDFV PSALAFLMNG EPDIVKNFLL KTLRLQSWEK 180
  181 KIDRFQLGEG VMPASFKVFH DPVRNHETLI ADFGESAIGR VAPVDSGFWW IILLRAYTKS 240
  241 TGDSSLADMP ECQKGIRLIL SLCLSEGFDT FPTLLCADGC CMIDRRMGVY GYPIEIQALF 300
  301 FMALRCALLL LKHDGEGKEM VEQIVKRLHA LSYHMRSYFW LDLKQLNDIY RYKTEEYSHT 360
  361 AVNKFNVIPD SLPEWVFDFM PPHGGFFIGN VSPARMDFRW FALGNCIAIL SSLATPEQST 420
  421 AIMDLIESRW EELVGEMPLK VCYPAIESHE WRIVTGCDPK NTRWSYHNGG SWPVLLWLLT 480
  481 AACIKTGRPQ IARRAIEVAE ARLHKDHWPE YYDGKVGRYV GKQSRKNQTW SVAGYLVAKM 540
  541 MLEDPSHVGM VCLEEDKQMK PVMRRSNSWT C

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 47.522879
Match: 1v7vA
Description: Crystal structure of Vibrio proteolyticus chitobiose phosphorylase
Matching Structure (courtesy of the PDB):

Predicted functions:

Term Confidence Notes
catalytic activity 0.632799902740898 bayes_pls_golite062009

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle