YRC Public Data Repository - Protein Structure Prediction

Protein:	gi\|15228433, gi\|...
Organism:	Arabidopsis thaliana
Length:	520 amino acids
Reference:	Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16

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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|15228433, gi|....

Description	E-value	Query Range	Subject Range
gi\|168823253, gi... - gi\|205340481\|gb\|EDZ27245.1\| outer membrane protein assembly complex, YaeT protein [Salmonella enteri... gi\|214000833 - gi\|214000833\|ref\|ZP_03411568.1\| outer membrane protein assembly factor YaeT [Salmonella enterica sub... BAMA_SALTI - Outer membrane protein assembly factor BamA OS=Salmonella typhi GN=bamA PE=3 SV=1 gi\|213646661 - gi\|213646661\|ref\|ZP_03376714.1\| outer membrane protein assembly factor YaeT [Salmonella enterica sub... gi\|213425950 - gi\|213425950\|ref\|ZP_03358700.1\| outer membrane protein assembly factor YaeT [Salmonella enterica sub... gi\|213163131 - gi\|213163131\|ref\|ZP_03348841.1\| outer membrane protein assembly factor YaeT [Salmonella enterica sub... gi\|29136388, gi\|... - gi\|29140764\|ref\|NP_804106.1\| outer membrane protein assembly factor YaeT [Salmonella enterica subsp.... gi\|16759214 - gi\|16759214\|ref\|NP_454831.1\| outer membrane protein assembly factor YaeT [Salmonella enterica subsp.... YAET_SALTI - Outer membrane protein assembly factor yaeT OS=Salmonella typhi GN=yaeT PE=3 SV=1	328.0	[0..12]	[519..282]

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Predicted Domain #1

Region A:
Residues: [1-520]

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MANPTENLDA NPQIREPEAE EEVEELNGYE GDDGGEDDDG EDDDTESKSQ TRESGSSVDR  60
   61 IKAESLFRRM RAAPVPVRVH DVIIGGNEKT KDHIIEAEVD AVREATTLQE LLEASRVANS 120
  121 NLRALDIFDS VNITLDSGPP ELPGTTNVVI DVVESKSPLT GQIGAYTRAE ARSSSVEASL 180
  181 KYKNIFGYGD IWDGSIVYGC DNSAEVGLGM YLPRFRGLST PFTSRLFLST QDWLKFSSYK 240
  241 ERSLGLSLGL FSSKYHELIY TIAWRNLIDP SQAAAVSIRR QLGHSLLSAL KYTFRFDQRN 300
  301 SSLRPTNGYA FISTSQIGGL APDSRSLRFL KQEVDLRYAV PFGFYNAAIN FGVSGGVSFP 360
  361 WGSGYQNRPS SIPERFFLGG NSSPVCSLSG PSALWGFKTR GVGPSEPKRK GDSERDFVGG 420
  421 DAAVTAFADL SFDLPVRWLR ERGIHGHVFA CAGNMAKLSE NEFRNFTAPK FLETFRTSVG 480
  481 AGIVLPTSLF RMELNYCHIL KKQEHDQARS GVFLTFSASS

[Run NCBI BLAST on this sequence.]

Detection Method:	PSI-BLAST
Confidence:	31.522879
Match:	2qdzA
Description:	No description for 2qdzA was found.

TMHMM	2.0c	PSIPRED	v2.61
SignalP	3.0	COILS	1999
DISOPRED	v0.1	NCBI nr	06/2007
PSI-BLAST	2.2.18	FFAS	ffas03
PDB	06/2007	Pfam	22
HMMER	2.3.2

View Structure Prediction Details

Top Sequence Alignment Hits