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View Structure Prediction Details

Protein: gi|17529298, gi|...
Organism: Arabidopsis thaliana
Length: 648 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|17529298, gi|....

Description E-value Query
Range
Subject
Range
gi|12324976, gi|... - pir||C96834 unknown protein F5I6.3 [imported] - Arabidopsis thaliana, gi|23198130|gb|AAN15592.1| un...
610.0 [0..1] [639..1]

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Predicted Domain #1
Region A:
Residues: [1-259]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAKSWFLVEK ARRCLRTVFF MVAMLASLLV SSLPLLVAIG DVLVPSFLLS SFTCVTCYGA  60
   61 KEHLRRYGFK RSLTDIPIVS VVRSFLVICI YLLSDVPALS HGPYLGTVSL CSVVSVLLLS 120
  121 VKACLFTVNS QLNNEASFSP SRKRLHLKKS WGMPVLFLSS VVFALGHTVV AYRTSCRARR 180
  181 KILYHRVDPE AVLSCKSIFS GHQKVPRSPT PVVGKASKFD GEARRKPLSH DEGELPVRLL 240
  241 ADVDSLFVTI RGLTVHYKL

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #2
Region A:
Residues: [260-648]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 CSPGSPRQSI SSNVLEANSS YNTPEIMAGR SKFDRKVLSM VTKSQHHHHH RSYNSLFNNS  60
   61 SLHDPLLDGS PTSPLLFKEI KEGTGLVDDM NVFNFGAEEQ DLGESGQFGV VLVHGFGGGV 120
  121 FSWRHVMGSL AQQLGCVVTA FDRPGWGLTA RPHKNDLEER QLLNPYSLEN QVEMLIAFCY 180
  181 EMGFSSVVFV GHDDGGLLAL KAAQRLMATN DPIKVVVKGV VLLNTSLSRE VVPAFARILL 240
  241 HTSLGKKHLV RPLLRTEIAQ VVNRRAWYDP AKMTTDVLRL YKAPLHVEGW DEALHEIGRL 300
  301 SSEMVLAPQN AASLLKAVEN LPVLVIAGAE DALVPLKSSQ GMASKLLNSR LVAISGCGHL 360
  361 PHEECPKALL AAMSPFITRL VIRPDLQSQ

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 51.39794
Match: 1cqzA
Description: Epoxide hydrolase, N-terminal domain; Mammalian epoxide hydrolase, C-terminal domain
Matching Structure (courtesy of the PDB):

Predicted functions:

Term Confidence Notes
catalytic activity 0.866238607554457 bayes_pls_golite062009
hydrolase activity 0.52702612560045 bayes_pls_golite062009

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle