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View Structure Prediction Details

Protein: GRH1_ARATH
Organism: Arabidopsis thaliana
Length: 585 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for GRH1_ARATH.

Description E-value Query
Range
Subject
Range
gi|113547417, gi... - gi|115450691|ref|NP_001048946.1| Os03g0145000 [Oryza sativa (japonica cultivar-group)], gi|113547417...
346.0 [0..24] [571..79]

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Predicted Domain #1
Region A:
Residues: [1-585]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MGLRFPPKVL EHILSFIDSN EDRNSVSLVC KSWFETERKT RKRVFVGNCY AVSPAAVTRR  60
   61 FPEMRSLTLK GKPHFADYNL VPDGWGGYAW PWIEAMAAKS SSLEEIRMKR MVVTDECLEK 120
  121 IAASFKDFKV LVLTSCEGFS TDGIAAIAAT CRNLRVLELR ECIVEDLGGD WLSYFPESST 180
  181 SLVSLDFSCL DSEVKISDLE RLVSRSPNLK SLKLNPAVTL DGLVSLLRCA PQLTELGTGS 240
  241 FAAQLKPEAF SKLSEAFSNC KQLQSLSGLW DVLPEYLPAL YSVCPGLTSL NLSYATVRMP 300
  301 DLVELLRRCS KLQKLWVMDL IEDKGLEAVA SYCKELRELR VFPSEPDLDA TNIPLTEQGL 360
  361 VFVSKGCRKL ESVLYFCVQF TNAALFTIAR KRPNLKCFRL CVIEPFAPDY KTNEPLDKGF 420
  421 KAIAEGCRDL RRLSVSGLLS DKAFKYIGKH AKKVRMLSIA FAGDSDLMLH HLLSGCESLK 480
  481 KLEIRDCPFG DTALLEHAAK LETMRSLWMS SCFVSFGACK LLSQKMPRLN VEVIDEHPPE 540
  541 SRPESSPVER IYIYRTVAGP RMDTPEFVWT IHKNPENGVS HLAIK

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 63.0
Match: 2p1mB
Description: No description for 2p1mB was found.

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle