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View Structure Prediction Details

Protein: CRPM1_ARATH
Organism: Arabidopsis thaliana
Length: 197 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for CRPM1_ARATH.

Description E-value Query
Range
Subject
Range
CRPM2_ARATH - Cold-regulated 413 plasma membrane protein 2 OS=Arabidopsis thaliana GN=COR413PM2 PE=2 SV=1
277.0 [0..1] [196..4]

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Predicted Domain #1
Region A:
Residues: [1-197]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MPMKSLRNDH GTLKAMIGSD FNELTIAAKN LATHAFTLTG LGFGTSVLEW VASIAAIYLL  60
   61 VLDRTNWKTN MLTSLLIPYI FFSLPSLIFG IFRGEIGKWI AFVAVVVQLF FPKHAREYLE 120
  121 LPVALVLLAV VAPNLIAGTF RDSWIGLAIC LGIGCYLLQE HIRASGGFRN AFTKANGISN 180
  181 TVGIICLVVF PVWALIF

[Run NCBI BLAST on this sequence.]

Detection Method: Pfam
Confidence: 126.677781
Match: PF05562.2
Description: No description for PF05562.2 was found.

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.


YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle