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View Structure Prediction Details

Protein: ACR5_ARATH
Organism: Arabidopsis thaliana
Length: 456 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for ACR5_ARATH.

Description E-value Query
Range
Subject
Range
gi|22138100, gi|... - pir||F84451 probable uridylyl transferase [imported] - Arabidopsis thaliana, gi|22138100|gb|AAM93430...
369.0 [0..11] [456..1]

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Predicted Domain #1
Region A:
Residues: [1-264]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MDVCLSYSYN MDDEIAKFIR RVNPPRVVID NEVCKDVTVI KVDSANKHGI LLEVVQVLTE  60
   61 LNLTIKKAYI SSDGGWFMDV FNVTDQDGNK VTDEIVLEYI RKSLGPDESS CFSPSMRSTI 120
  121 GVKQSVDYTV VELTGTDRPG LLSELCAVLM DLQCNVVNAE IWTHRAKAAA VLQVTDEETC 180
  181 SAITDPERLS KIRKLLGYVL TGGSSGRRFR EPKTTVSSAL NETHTDRKLH QLMFADRDYD 240
  241 EWENNVDDED KCGRVIPDVD VSNL

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 19.69897
Match: 1u8sA
Description: Crystal structure of putative glycine cleavage system transcriptional repressor
Matching Structure (courtesy of the PDB):

Predicted functions:

Term Confidence Notes
catalytic activity 0.115197515122073 bayes_pls_golite062009

Predicted Domain #2
Region A:
Residues: [265-456]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 HDLDYSIVMI KCKDRPKLLF DTVFTLTDMN YVVSHASIDA EGPQAYQEYY IRHTDGSPVK  60
   61 SEAERQRVIK CLKAAIQRRV SEGLKLELCT SDRVGLLSDV TRIFRENSLT VTRAEVKTKG 120
  121 DKALNTFYVR DASGYQVDTK TIESIRQVIG QTILQVKGGN TDAKPSPQDS PTGFLFGVFK 180
  181 SRSFVNFGLI RS

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 3.39794
Match: 2re1A
Description: No description for 2re1A was found.

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle