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View Structure Prediction Details

Protein: RHF2A_ARATH
Organism: Arabidopsis thaliana
Length: 375 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for RHF2A_ARATH.

Description E-value Query
Range
Subject
Range
gi|30688252 - gi|30688252|ref|NP_851051.1| RHF2A (RING-H2 GROUP F2A); protein binding / zinc ion binding [Arabidop...
154.0 [0..1] [375..1]

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Predicted Domain #1
Region A:
Residues: [1-162]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MEGAGETTTS EGHLTSAAAF VEGGIQDACD DACSICLESF CESDPSTLTS CKHEYHLQCI  60
   61 LEWCQRSSQC PMCWQSISLK DPTSQELLEA VEQERNFRFN PTRNATIFRH PTLGDFELQH 120
  121 LPVGVDNAEI EERIIQHLAA AAAMGRARHG VRREGHRSRS SS

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 6.69897
Match: 2cklB
Description: No description for 2cklB was found.

Predicted Domain #2
Region A:
Residues: [163-375]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 QGHQQFMVFS SQPNASSPPP HPPMPSSPSQ RDESDTVSNL PHNALGEGSH QSNTQPPTSS  60
   61 HPRQVSPSAS DSNSRPLNQS SPSEQDRAGP SELQSFSESL KSRLNAVSTR YKESISKNTR 120
  121 NWKDRLFSRN TSMADLGSEV KREVSAGIAT VSRMMERLET RENSRPSTAS VSDVSENHTP 180
  181 ETNNEHNRAA AGDEHSVNER GVKETCATGS GSS

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.


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