| Protein: | NAP1B_ARATH |
| Organism: | Arabidopsis thaliana |
| Length: | 379 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for NAP1B_ARATH.
| Description | E-value | Query Range |
Subject Range |
|
|
339.0 | [0..1] | [379..1] |
|
Region A: Residues: [1-379] |
1 11 21 31 41 51
| | | | | |
1 MSNDKDSMNM SDLSTALNEE DRAGLVNALK NKLQNLAGQH SDVLENLTPP VRKRVEFLRE 60
61 IQNQYDEMEA KFFEERAALE AKYQKLYQPL YTKRYEIVNG VVEVEGAAEE VKSEQGEDKS 120
121 AEEKGVPDFW LIALKNNEIT AEEITERDEG ALKYLKDIKW SRVEEPKGFK LEFFFDQNPY 180
181 FKNTVLTKTY HMIDEDEPIL EKALGTEIEW YPGKCLTQKI LKKKPKKGSK NTKPITKTED 240
241 CESFFNFFSP PQVPDDDEDL DDDMADELQG QMEHDYDIGS TIKEKIISHA VSWFTGEAVE 300
301 ADDLDIEDDD DEIDEDDDEE DEEDDEDDEE EDDEDDDEEE EADQGKKSKK KSSAGHKKAG 360
361 RSQLAEGQAG ERPPECKQQ
|
| Detection Method: |  |
| Confidence: | 59.69897 |
| Match: | 2ayuA |
| Description: | The structure of nucleosome assembly protein suggests a mechanism for histone binding and shuttling |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| histone binding | 4.83364158381373 | bayes_pls_golite062009 |
| binding | 2.47653887993806 | bayes_pls_golite062009 |
| protein binding | 1.48698502617247 | bayes_pls_golite062009 |
| nucleic acid binding | 0.320444049924598 | bayes_pls_golite062009 |
| DNA binding | 0.235974054244229 | bayes_pls_golite062009 |
