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View Structure Prediction Details

Protein: BSH_ARATH
Organism: Arabidopsis thaliana
Length: 240 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for BSH_ARATH.

Description E-value Query
Range
Subject
Range
gi|1843628 - gi|1843628|gb|AAB47766.1| SNF5 homolog BSH [Arabidopsis thaliana]
302.0 [0..1] [240..1]

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Predicted Domain #1
Region A:
Residues: [1-84]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKGLVSTGWK GPVKFRMPTA ENLVPIRLDI QFEGQRYKDA FTWNPSDPDN EVVIFAKRTV  60
   61 KDLKLPYAFV TQIAQSIQSQ LSDF

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.

Found no structure predictions for this domain.

Predicted Domain #2
Region A:
Residues: [85-240]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 RAYEGQDMYT GEKIIPIKLD LRVNHTLIKD QFLWDLNNFE SDPEEFARTL CKDLGVEDPE  60
   61 VGPAVAFAIR EQLYEIAIQS VASARESRLS KKGRRGSDHG SASKASGLSM DLMKLFSFKS 120
  121 SVVRKRKDLD VYEPVVDLLT SEEVDALEAR EERHAR

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.

Found no structure predictions for this domain.


YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle