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View Structure Prediction Details

Protein: gi|24030346, gi|...
Organism: Arabidopsis thaliana
Length: 461 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|24030346, gi|....

Description E-value Query
Range
Subject
Range
gi|110736181, gi... - gi|27808612|gb|AAO24586.1| At4g29690 [Arabidopsis thaliana], gi|110736181|dbj|BAF00062.1| nucleotide...
260.0 [0..2] [461..4]

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Predicted Domain #1
Region A:
Residues: [1-461]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAKTKNVISF KLSLIFLLNI FIVATIAAAA AVNAGTKGLD SRPSKTRRPW PFKKLNKPVV  60
   61 LMISCDGFRF GYQFKTDTPN IDLLISGGTE AKHGLIPVFP TMTFPNHYSI ATGLYPAYHG 120
  121 IIMNKFTDPV TGEVFNKGLQ PKWWLGEPLW VTAVNQGLKA VTYFWPGSEV LKSSWTCPEG 180
  181 YCPHFNLSVP LEERVDSVLS HFDHLEDEVP DLLMLYFDEP DQSGHNYGPD DPRVTTAVSR 240
  241 VDKMIGRVIK GLKQREIFDE VHVILLGDHG MVTNCECNEK AIYIDDLADW IKIPAAWIQA 300
  301 YSPVLAINPQ WGKDVENQSE KNAEVVAKMN EALSSGKVKN GEFLKVYLKE KLPERLHFSE 360
  361 SYRIPPIIGI VGEGLMVRQN RTNAQVCYGD HGYDNELFSM RTIFVGHGSR FSRGKKVPSF 420
  421 ENVQIYNVVA ELLGLRPAPN NGSSLFPRSI LLPSGATREV K

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 46.39794
Match: 2gsnA
Description: No description for 2gsnA was found.

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle