| Protein: | gi|12325149, gi|... |
| Organism: | Arabidopsis thaliana |
| Length: | 643 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|12325149, gi|....
| Description | E-value | Query Range |
Subject Range |
|
|
525.0 | [0..1] | [642..1] |
|
Region A: Residues: [1-64] |
1 11 21 31 41 51
| | | | | |
1 MALDSSVALS PRRRHGLLRD QVQLIKRKDS GRYEIVPIED PLSFEKGFYA VIRACQLLAQ 60
61 KNDG
|
| Detection Method: |  |
| Confidence: | 5.69897 |
| Match: | 2gksA |
| Description: | No description for 2gksA was found. |
|
Region A: Residues: [65-257] |
1 11 21 31 41 51
| | | | | |
1 LILVGLAGPS GAGKTIFTEK ILNFMPSIAI INMDNYNDGT RVIDGNFDDP RLTDYDTLLD 60
61 NIHGLRDGKP VQVPIYDFKS SSRIGYRTLE VPSSRIVILE GIYALSEKLR PLLDLRVSVT 120
121 GGVHFDLVKR VLRDIQRAGQ EPEEIIHQIS ETVYPMYKAF IEPDLKTAQI KILNKFNPFS 180
181 GFQNPTYILK SSK
|
| Detection Method: | |
| Confidence: | 42.0 |
| Match: | 1udwA |
| Description: | Crystal structure of human uridine-cytidine kinase 2 complexed with a feedback-inhibitor, CTP |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| nucleobase, nucleoside, nucleotide kinase activity | 2.98849022091298 | bayes_pls_golite062009 |
| nucleotide kinase activity | 2.24094813695083 | bayes_pls_golite062009 |
| phosphotransferase activity, phosphate group as acceptor | 1.96697952975573 | bayes_pls_golite062009 |
| kinase activity | 1.34679666271693 | bayes_pls_golite062009 |
| catalytic activity | 1.00104173493322 | bayes_pls_golite062009 |
| binding | 0.995117091387923 | bayes_pls_golite062009 |
|
Region A: Residues: [258-480] |
1 11 21 31 41 51
| | | | | |
1 AVTPEQMKAA LSEDFKERTE ETYDIYLLPP GEDPEACQSY LRMRNRDGKY NLMFEEWVTD 60
61 RPFIISPRIT FEVSVRLLGG LMALGYTIAT ILKRKSHIFD DDKVIVKTDW LEQLNRTYVQ 120
121 VQGKDRTFVK NVADQLGLEG SYVPHTYIEQ IQLERLVNDV LALPDDLKTK LSLDDDTVSS 180
181 PKEALSRASV DSRMKYLHGG VSKSYTNPRH KVLPNLTRLA VNN
|
| Detection Method: | |
| Confidence: | 48.30103 |
| Match: | 1bd3D |
| Description: | Uracil PRTase |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| transferase activity, transferring pentosyl groups | 2.53679639481311 | bayes_pls_golite062009 |
| catalytic activity | 2.30431811394775 | bayes_pls_golite062009 |
| transferase activity, transferring glycosyl groups | 2.21367942706564 | bayes_pls_golite062009 |
| transferase activity | 2.03376808731027 | bayes_pls_golite062009 |
| ribose phosphate diphosphokinase activity | 0.947697983706416 | bayes_pls_golite062009 |
| hypoxanthine phosphoribosyltransferase activity | 0.625087274084001 | bayes_pls_golite062009 |
| adenine phosphoribosyltransferase activity | 0.405495572845759 | bayes_pls_golite062009 |
| amidophosphoribosyltransferase activity | 0.360901350940423 | bayes_pls_golite062009 |
| uracil phosphoribosyltransferase activity | 0.342418548886662 | bayes_pls_golite062009 |
| diphosphotransferase activity | 0.00536560811791126 | bayes_pls_golite062009 |
|
Region A: Residues: [481-643] |
1 11 21 31 41 51
| | | | | |
1 RMLDARAPAS PATLPNQGFI TQLSDQISTL NERMDEFTSR IEELNSKIPN RIAPSGSQHN 60
61 LALPIENGNG SVLSFSASAS QLVRESPLME EVVLVARGQR QIMHQMDTLS NLLREYVGEK 120
121 TRIERLDSSR TNSTTQNLES STVPILLGLA IGCVGIFAYS RLK
|
| Detection Method: | |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
