| Protein: | C3H46_ARATH |
| Organism: | Arabidopsis thaliana |
| Length: | 540 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for C3H46_ARATH.
| Description | E-value | Query Range |
Subject Range |
|
|
416.0 | [0..1] | [540..1] |
|
Region A: Residues: [1-108] |
1 11 21 31 41 51
| | | | | |
1 MDGYEATRIV LSRIQSLDPE NASKIMGLLL LQDHGEKEMI RLAFGPETLV HSVIVKAKKE 60
61 LGLMNCSRSP WSHQDELISP KNNRGSSLNP ASLPFYANGG RSSRDLTN
|
| Detection Method: |  |
| Confidence: | 1.17 |
| Match: | 1g9lA |
| Description: | poly(A) binding protein |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [109-168] |
1 11 21 31 41 51
| | | | | |
1 DFELMDDMNS RSTDFLGSVH ARSGSCVLDG LGYGGDSDLG FGGVPCSYFA RGFCKNGASC 60
61
|
| Detection Method: | |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [169-349] |
1 11 21 31 41 51
| | | | | |
1 RFVHSDGGAD LVGSPSRIEL LRSNSVPPRL AHHFMTRSSL PSFSTKGVNL QQNDVQRAAA 60
61 ALMIGDELQK LGRWRPERID LSAMACPASR QIYLTFPADS RFREEDVSNY FSTFGPVQDV 120
121 RIPYQQKRMF GFVTFVYPET VKSILAKGNP HFVCDSRVLV KPYKEKGKVP DKYRTNQTTE 180
181 R
|
| Detection Method: | |
| Confidence: | 43.045757 |
| Match: | 1pgzA |
| Description: | Crystal Structure of UP1 Complexed With d(TTAGGGTTAG(6-MI)G); A Human Telomeric Repeat Containing 6-methyl-8-(2-deoxy-beta-ribofuranosyl)isoxanthopteridine (6-MI) |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [350-540] |
1 11 21 31 41 51
| | | | | |
1 ELSPTGLDSS PRDVLGGRGF YNNTQDVLWR SKFEEEILEL QSRRLMNLQL LDVKKHFQLN 60
61 SPTNIHSPNP FSQSLISPRP LSVIKREYDG GEKGKGSSKE GSDDDTMNLP ERLEDSLPDS 120
121 PFASPAHHLL LFADSADNNG SDLWSPSSDN DDNSTPSTLS DSFNSFNYQM PRLPAIGMLP 180
181 GRGGPTCRVG I
|
| Detection Method: | |
Shown below is our most confident prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
