YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

View Structure Prediction Details

Protein: gi|5541720, gi|2...
Organism: Arabidopsis thaliana
Length: 88 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



[What does the above image mean?]


[Show Ginzu Version Information]


Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|5541720, gi|2....

Description E-value Query
Range
Subject
Range
gi|2130028 - pir||S60284 B12D protein - barley
gi|3445292, gi|4... - gi|471319|emb|CAA54065.1| HvB12D [Hordeum vulgare subsp. vulgare], gi|3445292|emb|CAA70936.1| B12Dg1...
159.0 [0..1] [87..1]

Back

Predicted Domain #1
Region A:
Residues: [1-88]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MASRWLRPEV YPLFAATGVA VGICAFSLIR NITGNPEVRC TKENRAAGIL DNHAEGEKYK  60
   61 ENFLRKFVRN KKPEIMPGLN KFFTDPTY

[Run NCBI BLAST on this sequence.]

Detection Method: Pfam
Confidence: 70.958607
Match: PF06522.2
Description: No description for PF06522.2 was found.

Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.

    MCM
Score
GO
Score
GO
Term
SCOP
Match
SCOP Description
View Download 0.452 N/A N/A a.164.1 C-terminal domain of DFF45/ICAD (DFF-C domain)
View Download 0.368 N/A N/A a.155.1 H-NS histone-like proteins
View Download 0.353 N/A N/A b.84.2 Rudiment single hybrid motif
View Download 0.333 N/A N/A b.84.2 Rudiment single hybrid motif
View Download 0.322 N/A N/A a.164.1 C-terminal domain of DFF45/ICAD (DFF-C domain)


YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle