YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

View Structure Prediction Details

Protein: SUS3_ARATH
Organism: Arabidopsis thaliana
Length: 809 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



[What does the above image mean?]


[Show Ginzu Version Information]


Top Sequence Alignment Hits

No multiple sequence alignment data found for SUS3_ARATH.

Predicted Domain #1
Region A:
Residues: [1-170]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MANPKLTRVL STRDRVQDTL SAHRNELVAL LSRYVDQGKG ILQPHNLIDE LESVIGDDET  60
   61 KKSLSDGPFG EILKSAMEAI VVPPFVALAV RPRPGVWEYV RVNVFELSVE QLTVSEYLRF 120
  121 KEELVDGPNS DPFCLELDFE PFNANVPRPS RSSSIGNGVQ FLNRHLSSVM 

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #2
Region A:
Residues: [171-276]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 FRNKDCLEPL LDFLRVHKYK GHPLMLNDRI QSISRLQIQL SKAEDHISKL SQETPFSEFE  60
   61 YALQGMGFEK GWGDTAGRVL EMMHLLSDIL QAPDPSSLEK FLGMVP

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #3
Region A:
Residues: [277-809]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MVFNVVILSP HGYFGQANVL GLPDTGGQVV YILDQVRALE TEMLLRIKRQ GLDISPSILI  60
   61 VTRLIPDAKG TTCNQRLERV SGTEHTHILR VPFRSEKGIL RKWISRFDVW PYLENYAQDA 120
  121 ASEIVGELQG VPDFIIGNYS DGNLVASLMA HRMGVTQCTI AHALEKTKYP DSDIYWKDFD 180
  181 NKYHFSCQFT ADLIAMNNAD FIITSTYQEI AGTKNTVGQY ESHGAFTLPG LYRVVHGIDV 240
  241 FDPKFNIVSP GADMTIYFPY SEETRRLTAL HGSIEEMLYS PDQTDEHVGT LSDRSKPILF 300
  301 SMARLDKVKN ISGLVEMYSK NTKLRELVNL VVIAGNIDVN KSKDREEIVE IEKMHNLMKN 360
  361 YKLDGQFRWI TAQTNRARNG ELYRYIADTR GAFAQPAFYE AFGLTVVEAM TCGLPTFATC 420
  421 HGGPAEIIEH GLSGFHIDPY HPEQAGNIMA DFFERCKEDP NHWKKVSDAG LQRIYERYTW 480
  481 KIYSERLMTL AGVYGFWKYV SKLERRETRR YLEMFYILKF RDLVKTVPST ADD

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 61.39794
Match: 2r60A
Description: No description for 2r60A was found.

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle