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View Structure Prediction Details

Protein: ARAD2_ARATH
Organism: Arabidopsis thaliana
Length: 443 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for ARAD2_ARATH.

Description E-value Query
Range
Subject
Range
ARAD1_ARATH - Probable arabinosyltransferase ARAD1 OS=Arabidopsis thaliana GN=ARAD1 PE=1 SV=1
409.0 [0..9] [443..4]

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Predicted Domain #1
Region A:
Residues: [1-240]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MNPKIRKPNN SSSKKVTVSV LSVFLVFVFV NTFFYPSFYS DSGSIRRNLV DSRESFHFPG  60
   61 NFRKTKVYMY ELPTNFTYGV IEQHGGEKSD DVTGLKYPGH QHMHEWYLYS DLTRPEVKRV 120
  121 GSPIVRVFDP AEADLFYVSA FSSLSLIVDS GRPGFGYSDE EMQESLVSWL ESQEWWRRNN 180
  181 GRDHVIVAGD PNALKRVMDR VKNAVLLVTD FDRLRADQGS LVKDVIIPYS HRIDAYEGEL 240
  241 

[Run NCBI BLAST on this sequence.]

Detection Method: Pfam
Confidence: 7.769551
Match: PF03016.6
Description: No description for PF03016.6 was found.

Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.

Found no structure predictions for this domain.

Predicted Domain #2
Region A:
Residues: [241-443]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 GVKQRTNLLF FMGNRYRKDG GKVRDLLFKL LEKEEDVVIK RGTQSRENMR AVKQGMHTSK  60
   61 FCLHLAGDTS SACRLFDAIA SLCVPVIVSD GIELPFEDVI DYRKFSIFLR RDAALKPGFV 120
  121 VKKLRKVKPG KILKYQKVMK EVRRYFDYTH LNGSVNEIWR QVTKKIPLIK LMINREKRMI 180
  181 KRDGSDPQCS CLCSNQTGII HGV

[Run NCBI BLAST on this sequence.]

Detection Method: FFAS03
Confidence: 1.17
Match: 2nzwA
Description: No description for 2nzwA was found.

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle