| Protein: | PTR3_ARATH |
| Organism: | Arabidopsis thaliana |
| Length: | 582 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for PTR3_ARATH.
| Description | E-value | Query Range |
Subject Range |
|
|
353.0 | [0..5] | [565..2] |
|
Region A: Residues: [1-449] |
1 11 21 31 41 51
| | | | | |
1 MTVEEVGDDY TKDGTVDLQG NPVRRSIRGR WKACSFVVVY EVFERMAYYG ISSNLFIYMT 60
61 TKLHQGTVKS SNNVTNWVGT SWLTPILGAY VGDALLGRYI TFVISCAIYF SGMMVLTLSV 120
121 TIPGIKPPEC STTNVENCEK ASVLQLAVFF GALYTLAIGT GGTKPNISTI GADQFDVFDP 180
181 KEKTQKLSFF NWWMFSIFFG TLFANTVLVY VQDNVGWTLG YGLPTLGLAI SITIFLLGTP 240
241 FYRHKLPTGS PFTKMARVIV ASFRKANAPM THDITSFHEL PSLEYERKGA FPIHPTPSLR 300
301 FLDRASLKTG TNHKWNLCTT TEVEETKQML RMLPVLFITF VPSMMLAQIN TLFVKQGTTL 360
361 DRKVTGSFSI PPASLSGFVT LSMLISIVLY DRVFVKITRK FTGNPRGITL LQRMGIGLIF 420
421 HILIMIVASV TERYRLKVAA DHGLIHQTG
|
| Detection Method: |  |
| Confidence: | 9.0 |
| Match: | 1pw4A |
| Description: | Crystal Structure of the Glycerol-3-Phosphate Transporter from E.Coli |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| transporter activity | 4.09176719149278 | bayes_pls_golite062009 |
| substrate-specific transporter activity | 3.59744164024479 | bayes_pls_golite062009 |
| transmembrane transporter activity | 3.5865018981083 | bayes_pls_golite062009 |
| substrate-specific transmembrane transporter activity | 3.54194478414824 | bayes_pls_golite062009 |
| ion transmembrane transporter activity | 2.21266150105753 | bayes_pls_golite062009 |
| organic acid transmembrane transporter activity | 2.15783210522667 | bayes_pls_golite062009 |
| cation transmembrane transporter activity | 1.79369588808394 | bayes_pls_golite062009 |
| active transmembrane transporter activity | 1.59419818573076 | bayes_pls_golite062009 |
| binding | 1.26757615356623 | bayes_pls_golite062009 |
| secondary active transmembrane transporter activity | 1.22264637452409 | bayes_pls_golite062009 |
| polyol transmembrane transporter activity | 0.924836669821548 | bayes_pls_golite062009 |
| alcohol transmembrane transporter activity | 0.924836669821548 | bayes_pls_golite062009 |
| glycerol transmembrane transporter activity | 0.812001619402678 | bayes_pls_golite062009 |
| symporter activity | 0.74591237387473 | bayes_pls_golite062009 |
| solute:cation symporter activity | 0.74591237387473 | bayes_pls_golite062009 |
| cation:sugar symporter activity | 0.143419068761182 | bayes_pls_golite062009 |
| sugar:hydrogen symporter activity | 0.143419068761182 | bayes_pls_golite062009 |
|
Region A: Residues: [450-582] |
1 11 21 31 41 51
| | | | | |
1 VKLPLTIFAL LPQFVLMGMA DSFLEVAKLE FFYDQAPESM KSLGTSYSTT SLAIGNFMSS 60
61 FLLSTVSEIT KKRGRGWILN NLNESRLDYY YLFFAVLNLV NFVLFLVVVK FYVYRAEVTD 120
121 SVDVKEVEMK ETE
|
| Detection Method: | |
| Confidence: | 1.34 |
| Match: | 1pw4A |
| Description: | Crystal Structure of the Glycerol-3-Phosphate Transporter from E.Coli |
| Matching Structure (courtesy of the PDB): |
|
