| Protein: | TTL3_ARATH |
| Organism: | Arabidopsis thaliana |
| Length: | 691 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for TTL3_ARATH.
| Description | E-value | Query Range |
Subject Range |
|
|
345.0 | [0..86] | [691..406] |
|
Region A: Residues: [1-86] |
1 11 21 31 41 51
| | | | | |
1 MSHSRRLSLE PAIDSITGRF RDLQRNDDDV NKPDFRELDL GSPVSTLMPR GSASSSAAAT 60
61 PTSSSGSSGS ASGKPSVSSQ MAKRLD
|
| Detection Method: |  |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [87-215] |
1 11 21 31 41 51
| | | | | |
1 DAYKSHSGEL SSPGSGMPTT TRILKPGHRR SSSTGTPLIF SGSSFTSATS HTSPQGGGSG 60
61 ATSAVSPNTG VLPAGNICPS GRILKTGMAS RTSSRTETLC TGTGNYGHGN VVRSGGGGGT 120
121 SGKAVRVAE
|
| Detection Method: | |
| Confidence: | 53.09691 |
| Match: | 1w3bA |
| Description: | The superhelical TPR domain of O-linked GlcNAc transferase reveals structural similarities to importin alpha. |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [216-691] |
1 11 21 31 41 51
| | | | | |
1 NGENPEELKR MGNDMYRRGS FSEALSLYDR AILISPGNAA YRSNRAAALT ALRRLGEAVK 60
61 ECLEAVRIDP SYSRAHQRLA SLYLRLGEAE NARRHICFSG QCPDQADLQR LQTLEKHLRR 120
121 CWEARKIGDW KTAIKETDAA IANGADSSPQ LVACKAEAFL RLKQIEDSDF CVSCIPRLDH 180
181 HYHSQPQVKL FGMVVEAYVL CIQAQVDMAL GRFENAVVKA ERAAMLDQTN PEVVSVLNNV 240
241 KMVVRARTRG NELFSSGRFS EACVAYGDGL KQDDSNSVLY CNRAACWYKL GLWEKSVEDC 300
301 NHALKSQPSY IKALLRRAAS YGKLGRWEDA VKDYEFLRRE LPGDSEVAES LERAKTVLMN 360
361 RSQESKSLGF NNEVEAVSTL DKFKKSVALP GVSVFHFKSS SNRQCEEISP FINTLCLRYP 420
421 LVHFFMVDVE ESMALAKAES IRKVPTFKMY KNGDKVKEMV CPSHQFLEDS IKHFLL
|
| Detection Method: | |
| Confidence: | 38.69897 |
| Match: | 2gw1A |
| Description: | No description for 2gw1A was found. |
